Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC005021.1-201ENST00000608730 355 ntBASIC3.65□□□□□ -1.83
HOXA9P31269 OR2BH1P-201ENST00000608850 864 ntBASIC3.65□□□□□ -1.83
HOXA9P31269 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXA9P31269 AC019080.5-201ENST00000624891 757 ntBASIC3.65□□□□□ -1.83
HOXA9P31269 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXA9P31269 SEPT7P7-201ENST00000420492 1301 ntBASIC3.65□□□□□ -1.83
HOXA9P31269 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXA9P31269 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXA9P31269 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXA9P31269 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXA9P31269 MTND4P10-201ENST00000446199 1363 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 AC119744.1-201ENST00000454746 1715 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXA9P31269 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXA9P31269 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HOXA9P31269 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HOXA9P31269 RNU6-666P-201ENST00000363499 107 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 SNORA27.3-201ENST00000364937 134 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXA9P31269 Z98941.1-201ENST00000407764 100 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 RHEBP3-201ENST00000411920 351 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXA9P31269 CR848007.2-201ENST00000424918 787 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXA9P31269 RNF19BPX-201ENST00000426224 625 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXA9P31269 UBE2V1P1-201ENST00000430836 445 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 AC007563.3-201ENST00000433233 371 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 RPS7P5-201ENST00000441482 581 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 VN1R48P-201ENST00000448149 1036 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXA9P31269 AC010307.1-201ENST00000467206 836 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 SNRPGP3-201ENST00000469405 227 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 AC078817.1-201ENST00000492623 435 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXA9P31269 FABP5P6-201ENST00000510588 409 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 AC023141.12-201ENST00000512399 199 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.64□□□□□ -1.83
HOXA9P31269 AC106785.3-201ENST00000564064 847 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXA9P31269 KLKP1-201ENST00000595979 403 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 MIMT1-201ENST00000597105 1050 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 BRDTP1-201ENST00000605735 677 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXA9P31269 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HOXA9P31269 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXA9P31269 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
HOXA9P31269 Z83843.1-201ENST00000604070 3685 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 CR381670.1-201ENST00000624291 1693 ntBASIC3.64□□□□□ -1.83
HOXA9P31269 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.64□□□□□ -1.83
HOXA9P31269 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.64□□□□□ -1.83
HOXA9P31269 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXA9P31269 AC000367.1-201ENST00000452711 1766 ntBASIC3.63□□□□□ -1.83
HOXA9P31269 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA9P31269 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA9P31269 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXA9P31269 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXA9P31269 ZNF833P-201ENST00000424938 1494 ntBASIC3.63□□□□□ -1.83
HOXA9P31269 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXA9P31269 AL365396.1-201ENST00000430854 671 ntBASIC3.63□□□□□ -1.83
HOXA9P31269 ZFAND6P1-201ENST00000434138 605 ntBASIC3.63□□□□□ -1.83
HOXA9P31269 MTCO3P43-201ENST00000440974 771 ntBASIC3.63□□□□□ -1.83
HOXA9P31269 RPS29P31-201ENST00000446147 164 ntBASIC3.63□□□□□ -1.83
HOXA9P31269 AP002345.1-201ENST00000456493 928 ntBASIC3.63□□□□□ -1.83
HOXA9P31269 AC104629.2-201ENST00000468627 598 ntBASIC3.63□□□□□ -1.83
HOXA9P31269 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXA9P31269 AL049830.2-201ENST00000480072 201 ntBASIC3.63□□□□□ -1.83
HOXA9P31269 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXA9P31269 RPL23AP73-201ENST00000492507 471 ntBASIC3.63□□□□□ -1.83
HOXA9P31269 RPL5P23-201ENST00000496040 868 ntBASIC3.63□□□□□ -1.83
HOXA9P31269 AC110794.1-201ENST00000505816 425 ntBASIC3.63□□□□□ -1.83
HOXA9P31269 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXA9P31269 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXA9P31269 OR4V1P-201ENST00000525394 1140 ntBASIC3.63□□□□□ -1.83
HOXA9P31269 PTP4A1P6-201ENST00000531034 478 ntBASIC3.63□□□□□ -1.83
HOXA9P31269 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXA9P31269 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXA9P31269 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXA9P31269 AC099489.2-201ENST00000574976 260 ntBASIC3.63□□□□□ -1.83
HOXA9P31269 AC105429.2-201ENST00000610567 517 ntBASIC3.63□□□□□ -1.83
HOXA9P31269 U6.98-201ENST00000637157 84 ntBASIC3.63□□□□□ -1.83
HOXA9P31269 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA9P31269 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA9P31269 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXA9P31269 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA9P31269 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HOXA9P31269 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
HOXA9P31269 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXA9P31269 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA9P31269 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXA9P31269 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA9P31269 AL592494.2-201ENST00000425455 1548 ntBASIC3.62□□□□□ -1.83
HOXA9P31269 RSL24D1P1-201ENST00000404972 493 ntBASIC3.62□□□□□ -1.83
HOXA9P31269 AC006989.1-201ENST00000427212 131 ntBASIC3.62□□□□□ -1.83
HOXA9P31269 SKP1P1-201ENST00000438081 489 ntBASIC3.62□□□□□ -1.83
HOXA9P31269 AC009263.1-201ENST00000441193 1239 ntBASIC3.62□□□□□ -1.83
HOXA9P31269 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXA9P31269 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXA9P31269 AL136097.1-201ENST00000456945 913 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms