Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
XRCC1P18887 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.69□□□□□ -1.82
XRCC1P18887 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
XRCC1P18887 MOB1AP1-201ENST00000430903 535 ntBASIC3.69□□□□□ -1.82
XRCC1P18887 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.69□□□□□ -1.82
XRCC1P18887 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.69□□□□□ -1.82
XRCC1P18887 UBE2V1P5-201ENST00000440070 405 ntBASIC3.69□□□□□ -1.82
XRCC1P18887 SETD6P1-201ENST00000444575 317 ntBASIC3.69□□□□□ -1.82
XRCC1P18887 AL096803.2-201ENST00000450032 677 ntBASIC3.69□□□□□ -1.82
XRCC1P18887 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.69□□□□□ -1.82
XRCC1P18887 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.69□□□□□ -1.82
XRCC1P18887 BX248409.1-201ENST00000455497 255 ntBASIC3.69□□□□□ -1.82
XRCC1P18887 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.69□□□□□ -1.82
XRCC1P18887 AC126121.1-201ENST00000482313 553 ntBASIC3.69□□□□□ -1.82
XRCC1P18887 UBE2CP3-201ENST00000502715 450 ntBASIC3.69□□□□□ -1.82
XRCC1P18887 AC008885.2-201ENST00000509506 930 ntBASIC3.69□□□□□ -1.82
XRCC1P18887 RNU1-95P-201ENST00000516357 160 ntBASIC3.69□□□□□ -1.82
XRCC1P18887 RNU1-128P-201ENST00000516704 160 ntBASIC3.69□□□□□ -1.82
XRCC1P18887 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.69□□□□□ -1.82
XRCC1P18887 SUMO2P20-201ENST00000520803 283 ntBASIC3.69□□□□□ -1.82
XRCC1P18887 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.69□□□□□ -1.82
XRCC1P18887 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.69□□□□□ -1.82
XRCC1P18887 AC092451.2-201ENST00000538746 658 ntBASIC3.69□□□□□ -1.82
XRCC1P18887 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.69□□□□□ -1.82
XRCC1P18887 MIR4429-201ENST00000580105 73 ntBASIC3.69□□□□□ -1.82
XRCC1P18887 AP000919.1-202ENST00000581139 1264 ntBASIC3.69□□□□□ -1.82
XRCC1P18887 RNU1-30P-201ENST00000606575 163 ntBASIC3.69□□□□□ -1.82
XRCC1P18887 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.69□□□□□ -1.82
XRCC1P18887 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.69□□□□□ -1.82
XRCC1P18887 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.69□□□□□ -1.82
XRCC1P18887 OR8B1P-202ENST00000641132 1178 ntBASIC3.69□□□□□ -1.82
XRCC1P18887 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
XRCC1P18887 AC073055.1-201ENST00000456901 1621 ntBASIC3.69□□□□□ -1.82
XRCC1P18887 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
XRCC1P18887 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.68□□□□□ -1.82
XRCC1P18887 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
XRCC1P18887 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
XRCC1P18887 RNA5SP391-201ENST00000363456 119 ntBASIC3.68□□□□□ -1.82
XRCC1P18887 RNU6-283P-201ENST00000364788 107 ntBASIC3.68□□□□□ -1.82
XRCC1P18887 MIR23B-201ENST00000384832 97 ntBASIC3.68□□□□□ -1.82
XRCC1P18887 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.68□□□□□ -1.82
XRCC1P18887 AC006994.1-201ENST00000438212 839 ntBASIC3.68□□□□□ -1.82
XRCC1P18887 HSFY3P-201ENST00000444242 1191 ntBASIC3.68□□□□□ -1.82
XRCC1P18887 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.68□□□□□ -1.82
XRCC1P18887 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.68□□□□□ -1.82
XRCC1P18887 DNAJC19P8-201ENST00000452887 259 ntBASIC3.68□□□□□ -1.82
XRCC1P18887 HMGN2P7-201ENST00000456186 273 ntBASIC3.68□□□□□ -1.82
XRCC1P18887 UBDP1-202ENST00000457888 382 ntBASIC3.68□□□□□ -1.82
XRCC1P18887 AC084198.1-201ENST00000477747 402 ntBASIC3.68□□□□□ -1.82
XRCC1P18887 AC073522.1-201ENST00000483312 377 ntBASIC3.68□□□□□ -1.82
XRCC1P18887 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.68□□□□□ -1.82
XRCC1P18887 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.68□□□□□ -1.82
XRCC1P18887 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
XRCC1P18887 AC124293.1-201ENST00000530034 493 ntBASIC3.68□□□□□ -1.82
XRCC1P18887 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
XRCC1P18887 SERPINE4P-201ENST00000554978 281 ntBASIC3.68□□□□□ -1.82
XRCC1P18887 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.68□□□□□ -1.82
XRCC1P18887 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.68□□□□□ -1.82
XRCC1P18887 MIR4738-201ENST00000579134 87 ntBASIC3.68□□□□□ -1.82
XRCC1P18887 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.68□□□□□ -1.82
XRCC1P18887 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.68□□□□□ -1.82
XRCC1P18887 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.68□□□□□ -1.82
XRCC1P18887 SNORA62.6-201ENST00000606322 83 ntBASIC3.68□□□□□ -1.82
XRCC1P18887 AP005229.2-201ENST00000609980 697 ntBASIC3.68□□□□□ -1.82
XRCC1P18887 AC006249.1-201ENST00000621223 471 ntBASIC3.68□□□□□ -1.82
XRCC1P18887 AC068880.4-201ENST00000623082 495 ntBASIC3.68□□□□□ -1.82
XRCC1P18887 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.68□□□□□ -1.82
XRCC1P18887 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
XRCC1P18887 AC073073.2-201ENST00000609827 2578 ntBASIC3.68□□□□□ -1.82
XRCC1P18887 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
XRCC1P18887 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.68□□□□□ -1.82
XRCC1P18887 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
XRCC1P18887 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
XRCC1P18887 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
XRCC1P18887 ZNF849P-201ENST00000594711 1566 ntBASIC3.68□□□□□ -1.82
XRCC1P18887 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
XRCC1P18887 ZNF285B-201ENST00000561698 1767 ntBASIC3.67□□□□□ -1.82
XRCC1P18887 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
XRCC1P18887 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
XRCC1P18887 U3.15-201ENST00000365398 212 ntBASIC3.67□□□□□ -1.82
XRCC1P18887 SNORD6-201ENST00000365444 73 ntBASIC3.67□□□□□ -1.82
XRCC1P18887 RPL21P17-201ENST00000397467 475 ntBASIC3.67□□□□□ -1.82
XRCC1P18887 PTP4A1P5-201ENST00000420305 455 ntBASIC3.67□□□□□ -1.82
XRCC1P18887 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
XRCC1P18887 MTCO2P1-201ENST00000424648 477 ntBASIC3.67□□□□□ -1.82
XRCC1P18887 DEFB130D-201ENST00000426866 237 ntBASIC3.67□□□□□ -1.82
XRCC1P18887 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.67□□□□□ -1.82
XRCC1P18887 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.67□□□□□ -1.82
XRCC1P18887 AC008065.1-201ENST00000428525 348 ntBASIC3.67□□□□□ -1.82
XRCC1P18887 UBE2V1P6-201ENST00000430840 422 ntBASIC3.67□□□□□ -1.82
XRCC1P18887 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.67□□□□□ -1.82
XRCC1P18887 GOT2P5-201ENST00000433995 546 ntBASIC3.67□□□□□ -1.82
XRCC1P18887 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.67□□□□□ -1.82
XRCC1P18887 AC006480.1-201ENST00000449887 378 ntBASIC3.67□□□□□ -1.82
XRCC1P18887 AC004801.2-202ENST00000463559 283 ntBASIC3.67□□□□□ -1.82
XRCC1P18887 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.67□□□□□ -1.82
XRCC1P18887 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.67□□□□□ -1.82
XRCC1P18887 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
XRCC1P18887 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.67□□□□□ -1.82
XRCC1P18887 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms