Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CTSDP07339 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.71□□□□□ -1.98
CTSDP07339 AC104619.4-201ENST00000510773 249 ntBASIC2.71□□□□□ -1.98
CTSDP07339 APOOP4-201ENST00000513530 597 ntBASIC2.71□□□□□ -1.98
CTSDP07339 PAICSP4-201ENST00000517543 1253 ntBASIC2.71□□□□□ -1.98
CTSDP07339 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.71□□□□□ -1.98
CTSDP07339 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.71□□□□□ -1.98
CTSDP07339 EIF4EP5-201ENST00000528228 640 ntBASIC2.71□□□□□ -1.98
CTSDP07339 AP000619.3-201ENST00000535634 1127 ntBASIC2.71□□□□□ -1.98
CTSDP07339 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.71□□□□□ -1.98
CTSDP07339 GTF2IP22-201ENST00000554443 182 ntBASIC2.71□□□□□ -1.98
CTSDP07339 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.71□□□□□ -1.98
CTSDP07339 AC067852.4-201ENST00000590314 478 ntBASIC2.71□□□□□ -1.98
CTSDP07339 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.71□□□□□ -1.98
CTSDP07339 AC015802.5-201ENST00000607478 399 ntBASIC2.71□□□□□ -1.98
CTSDP07339 AL354976.1-201ENST00000613843 387 ntBASIC2.71□□□□□ -1.98
CTSDP07339 AL355578.1-201ENST00000607405 1328 ntBASIC2.7□□□□□ -1.98
CTSDP07339 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.7□□□□□ -1.98
CTSDP07339 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CTSDP07339 SNORA5A-201ENST00000384111 134 ntBASIC2.7□□□□□ -1.98
CTSDP07339 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CTSDP07339 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.7□□□□□ -1.98
CTSDP07339 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.7□□□□□ -1.98
CTSDP07339 RN7SKP58-201ENST00000411010 305 ntBASIC2.7□□□□□ -1.98
CTSDP07339 RAB9AP3-201ENST00000412737 573 ntBASIC2.7□□□□□ -1.98
CTSDP07339 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC2.7□□□□□ -1.98
CTSDP07339 ATP5C1P1-201ENST00000441945 895 ntBASIC2.7□□□□□ -1.98
CTSDP07339 AL133547.1-201ENST00000448546 220 ntBASIC2.7□□□□□ -1.98
CTSDP07339 RAB9AP1-201ENST00000449393 573 ntBASIC2.7□□□□□ -1.98
CTSDP07339 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.7□□□□□ -1.98
CTSDP07339 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.7□□□□□ -1.98
CTSDP07339 AC073387.1-201ENST00000453261 709 ntBASIC2.7□□□□□ -1.98
CTSDP07339 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.7□□□□□ -1.98
CTSDP07339 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.7□□□□□ -1.98
CTSDP07339 AC006483.1-201ENST00000487308 313 ntBASIC2.7□□□□□ -1.98
CTSDP07339 RPL5P23-201ENST00000496040 868 ntBASIC2.7□□□□□ -1.98
CTSDP07339 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.7□□□□□ -1.98
CTSDP07339 SNORA26.10-201ENST00000516427 141 ntBASIC2.7□□□□□ -1.98
CTSDP07339 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.7□□□□□ -1.98
CTSDP07339 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC2.7□□□□□ -1.98
CTSDP07339 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.7□□□□□ -1.98
CTSDP07339 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.7□□□□□ -1.98
CTSDP07339 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.7□□□□□ -1.98
CTSDP07339 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.7□□□□□ -1.98
CTSDP07339 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.7□□□□□ -1.98
CTSDP07339 AC034105.4-201ENST00000568304 277 ntBASIC2.7□□□□□ -1.98
CTSDP07339 AC005951.1-201ENST00000576706 485 ntBASIC2.7□□□□□ -1.98
CTSDP07339 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.7□□□□□ -1.98
CTSDP07339 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.7□□□□□ -1.98
CTSDP07339 MAGOH2P-202ENST00000584384 429 ntBASIC2.7□□□□□ -1.98
CTSDP07339 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.7□□□□□ -1.98
CTSDP07339 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC2.7□□□□□ -1.98
CTSDP07339 AL034408.1-202ENST00000636088 415 ntBASIC2.7□□□□□ -1.98
CTSDP07339 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CTSDP07339 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.7□□□□□ -1.98
CTSDP07339 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CTSDP07339 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CTSDP07339 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CTSDP07339 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
CTSDP07339 XPOTP1-201ENST00000443317 2398 ntBASIC2.69□□□□□ -1.98
CTSDP07339 AL353743.1-202ENST00000431724 1695 ntBASIC2.69□□□□□ -1.98
CTSDP07339 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CTSDP07339 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.69□□□□□ -1.98
CTSDP07339 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
CTSDP07339 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.69□□□□□ -1.98
CTSDP07339 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CTSDP07339 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CTSDP07339 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
CTSDP07339 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CTSDP07339 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
CTSDP07339 RNU6-1251P-201ENST00000364502 107 ntBASIC2.69□□□□□ -1.98
CTSDP07339 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CTSDP07339 AC240504.1-201ENST00000395709 845 ntBASIC2.69□□□□□ -1.98
CTSDP07339 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.69□□□□□ -1.98
CTSDP07339 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC2.69□□□□□ -1.98
CTSDP07339 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.69□□□□□ -1.98
CTSDP07339 MTCYBP29-201ENST00000436327 1006 ntBASIC2.69□□□□□ -1.98
CTSDP07339 RPS27P5-201ENST00000444247 244 ntBASIC2.69□□□□□ -1.98
CTSDP07339 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.69□□□□□ -1.98
CTSDP07339 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.69□□□□□ -1.98
CTSDP07339 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CTSDP07339 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.69□□□□□ -1.98
CTSDP07339 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.69□□□□□ -1.98
CTSDP07339 SAP18P1-201ENST00000512058 390 ntBASIC2.69□□□□□ -1.98
CTSDP07339 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.69□□□□□ -1.98
CTSDP07339 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.69□□□□□ -1.98
CTSDP07339 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC2.69□□□□□ -1.98
CTSDP07339 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.69□□□□□ -1.98
CTSDP07339 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.69□□□□□ -1.98
CTSDP07339 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.69□□□□□ -1.98
CTSDP07339 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.69□□□□□ -1.98
CTSDP07339 AC091488.1-201ENST00000604239 660 ntBASIC2.69□□□□□ -1.98
CTSDP07339 AC004832.5-201ENST00000608677 401 ntBASIC2.69□□□□□ -1.98
CTSDP07339 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.69□□□□□ -1.98
CTSDP07339 uc_338.9-201ENST00000617424 182 ntBASIC2.69□□□□□ -1.98
CTSDP07339 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CTSDP07339 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.69□□□□□ -1.98
CTSDP07339 AL133370.2-201ENST00000619934 439 ntBASIC2.69□□□□□ -1.98
CTSDP07339 AC034229.5-201ENST00000624258 185 ntBASIC2.69□□□□□ -1.98
CTSDP07339 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms