Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
MT-ND1P03886 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
MT-ND1P03886 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
MT-ND1P03886 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
MT-ND1P03886 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
MT-ND1P03886 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
MT-ND1P03886 RNU11-4P-201ENST00000391149 133 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
MT-ND1P03886 RPL7P27-201ENST00000403775 720 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 Z98941.1-201ENST00000407764 100 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 AC073264.1-201ENST00000411508 416 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 RPL31P2-201ENST00000413849 377 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 BTF3P8-201ENST00000414577 526 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 RPL26P29-201ENST00000415623 438 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 AC027644.1-201ENST00000419595 298 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
MT-ND1P03886 RPL23AP38-201ENST00000423801 469 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 AC093698.1-201ENST00000423843 571 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 C1DP1-201ENST00000426049 402 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 RPL36P19-201ENST00000430744 301 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.65□□□□□ -1.83
MT-ND1P03886 AL138799.3-201ENST00000438968 350 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.65□□□□□ -1.83
MT-ND1P03886 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.65□□□□□ -1.83
MT-ND1P03886 AL358794.1-201ENST00000445689 381 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
MT-ND1P03886 MTCO3P16-201ENST00000454456 754 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 AC106872.2-201ENST00000494303 480 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 RPS27AP13-201ENST00000498403 237 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 AC078918.1-201ENST00000498515 228 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
MT-ND1P03886 AC091860.1-201ENST00000505723 432 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 AC005921.1-201ENST00000510589 286 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.65□□□□□ -1.83
MT-ND1P03886 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
MT-ND1P03886 AC008837.1-201ENST00000511513 412 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
MT-ND1P03886 AC119751.1-201ENST00000513357 765 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
MT-ND1P03886 AC034205.1-201ENST00000520621 638 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 HIGD1AP6-201ENST00000521833 279 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 AC124293.1-201ENST00000530034 493 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 RFPL1S-203ENST00000539579 330 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 MTND1P24-201ENST00000552175 861 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 MTCYBP23-201ENST00000558717 1102 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.65□□□□□ -1.83
MT-ND1P03886 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.65□□□□□ -1.83
MT-ND1P03886 AC090616.5-202ENST00000582111 297 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 AC010928.3-201ENST00000587712 541 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
MT-ND1P03886 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
MT-ND1P03886 AC068790.4-201ENST00000602474 263 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 AL390816.3-201ENST00000604527 1066 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.65□□□□□ -1.83
MT-ND1P03886 AC009974.1-201ENST00000608881 455 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 U73479.1-201ENST00000618062 168 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.65□□□□□ -1.83
MT-ND1P03886 AC244205.2-202ENST00000635781 342 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
MT-ND1P03886 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
MT-ND1P03886 RPS4XP5-202ENST00000449995 1334 ntBASIC3.65□□□□□ -1.83
MT-ND1P03886 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
MT-ND1P03886 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
MT-ND1P03886 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.64□□□□□ -1.83
MT-ND1P03886 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.64□□□□□ -1.83
MT-ND1P03886 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.64□□□□□ -1.83
MT-ND1P03886 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
MT-ND1P03886 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
MT-ND1P03886 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
MT-ND1P03886 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
MT-ND1P03886 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
MT-ND1P03886 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
MT-ND1P03886 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
MT-ND1P03886 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.64□□□□□ -1.83
MT-ND1P03886 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
MT-ND1P03886 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
MT-ND1P03886 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
MT-ND1P03886 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.64□□□□□ -1.83
MT-ND1P03886 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.64□□□□□ -1.83
MT-ND1P03886 RPS7P9-201ENST00000414704 586 ntBASIC3.64□□□□□ -1.83
MT-ND1P03886 AC108032.1-201ENST00000416706 207 ntBASIC3.64□□□□□ -1.83
MT-ND1P03886 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.64□□□□□ -1.83
MT-ND1P03886 PAICSP7-201ENST00000419829 962 ntBASIC3.64□□□□□ -1.83
MT-ND1P03886 RPL21P109-201ENST00000422213 475 ntBASIC3.64□□□□□ -1.83
MT-ND1P03886 AC005517.2-201ENST00000424673 553 ntBASIC3.64□□□□□ -1.83
MT-ND1P03886 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.64□□□□□ -1.83
MT-ND1P03886 HIGD1AP4-201ENST00000430194 280 ntBASIC3.64□□□□□ -1.83
MT-ND1P03886 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.64□□□□□ -1.83
MT-ND1P03886 GTF2IP3-201ENST00000433887 494 ntBASIC3.64□□□□□ -1.83
MT-ND1P03886 SKP1P1-201ENST00000438081 489 ntBASIC3.64□□□□□ -1.83
MT-ND1P03886 AC083863.1-201ENST00000438811 231 ntBASIC3.64□□□□□ -1.83
MT-ND1P03886 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.64□□□□□ -1.83
MT-ND1P03886 AC002542.1-201ENST00000440683 193 ntBASIC3.64□□□□□ -1.83
MT-ND1P03886 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.64□□□□□ -1.83
MT-ND1P03886 AL031313.1-201ENST00000448435 256 ntBASIC3.64□□□□□ -1.83
MT-ND1P03886 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.64□□□□□ -1.83
MT-ND1P03886 DNAJC19P1-201ENST00000455312 319 ntBASIC3.64□□□□□ -1.83
MT-ND1P03886 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.64□□□□□ -1.83
MT-ND1P03886 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.64□□□□□ -1.83
MT-ND1P03886 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms