Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN9O95484 RNU1-45P-201ENST00000517191 141 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 AP000926.4-201ENST00000527351 454 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN9O95484 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN9O95484 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.52□□□□□ -1.85
CLDN9O95484 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN9O95484 MIR4504-201ENST00000577413 92 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN9O95484 RN7SL703P-201ENST00000578485 302 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 MIR5685-201ENST00000579080 79 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 MIR4738-201ENST00000579134 87 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN9O95484 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN9O95484 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN9O95484 AL049634.3-201ENST00000604968 457 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 AC022079.2-201ENST00000619739 566 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 AL356863.1-201ENST00000623378 1080 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 AL109659.3-201ENST00000624985 950 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN9O95484 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CLDN9O95484 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CLDN9O95484 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CLDN9O95484 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN9O95484 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN9O95484 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CLDN9O95484 MIR423-201ENST00000362201 94 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 SNORD56.4-201ENST00000363883 71 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 RNA5SP42-201ENST00000364278 115 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLDN9O95484 AL355379.1-201ENST00000405542 640 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 Z98941.1-201ENST00000407764 100 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 SNORA57.3-201ENST00000411095 141 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN9O95484 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.51□□□□□ -1.85
CLDN9O95484 AL445183.3-201ENST00000414168 502 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 AC245054.1-201ENST00000420944 258 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 AL159169.1-201ENST00000421119 127 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.51□□□□□ -1.85
CLDN9O95484 RPL36P19-201ENST00000430744 301 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 MTND4P15-201ENST00000437913 1033 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 Z95327.1-201ENST00000446082 482 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 RPS29P31-201ENST00000446147 164 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.51□□□□□ -1.85
CLDN9O95484 AL359073.1-201ENST00000448036 403 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.51□□□□□ -1.85
CLDN9O95484 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.51□□□□□ -1.85
CLDN9O95484 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN9O95484 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.51□□□□□ -1.85
CLDN9O95484 AC078817.1-201ENST00000492623 435 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 RPL5P23-201ENST00000496040 868 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.51□□□□□ -1.85
CLDN9O95484 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN9O95484 RNU6-202P-201ENST00000515998 96 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 RNA5SP309-201ENST00000516670 106 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 RNU6-579P-201ENST00000516879 102 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.51□□□□□ -1.85
CLDN9O95484 AP003717.3-201ENST00000544832 1180 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 OR6C73P-201ENST00000546432 358 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.51□□□□□ -1.85
CLDN9O95484 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.51□□□□□ -1.85
CLDN9O95484 EIF5A2P1-201ENST00000564027 460 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.51□□□□□ -1.85
CLDN9O95484 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.51□□□□□ -1.85
CLDN9O95484 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN9O95484 AC006077.1-201ENST00000604746 343 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 BNIP3P19-201ENST00000605397 577 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 HMGN2P28-201ENST00000606102 262 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 AC245100.7-201ENST00000609678 442 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 AL445493.3-201ENST00000619568 477 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 AC006213.5-201ENST00000619673 288 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN9O95484 AC132825.7-201ENST00000638744 335 ntBASIC3.51□□□□□ -1.85
CLDN9O95484 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CLDN9O95484 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.51□□□□□ -1.85
CLDN9O95484 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLDN9O95484 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.5□□□□□ -1.85
CLDN9O95484 AC008432.1-201ENST00000615912 1320 ntBASIC3.5□□□□□ -1.85
CLDN9O95484 MFSD8-213ENST00000641134 1327 ntBASIC3.5□□□□□ -1.85
CLDN9O95484 AC007656.2-201ENST00000624902 4547 ntBASIC3.5□□□□□ -1.85
CLDN9O95484 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN9O95484 RNA5SP235-201ENST00000365411 114 ntBASIC3.5□□□□□ -1.85
CLDN9O95484 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLDN9O95484 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN9O95484 RPL7P60-201ENST00000397636 735 ntBASIC3.5□□□□□ -1.85
CLDN9O95484 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
CLDN9O95484 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.5□□□□□ -1.85
CLDN9O95484 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.5□□□□□ -1.85
CLDN9O95484 UBE2V1P1-201ENST00000430836 445 ntBASIC3.5□□□□□ -1.85
CLDN9O95484 AL512661.1-201ENST00000434586 1253 ntBASIC3.5□□□□□ -1.85
CLDN9O95484 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.5□□□□□ -1.85
CLDN9O95484 AL590399.6-201ENST00000446396 307 ntBASIC3.5□□□□□ -1.85
CLDN9O95484 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN9O95484 TVP23BP2-201ENST00000455082 615 ntBASIC3.5□□□□□ -1.85
CLDN9O95484 SNORA84-201ENST00000459229 133 ntBASIC3.5□□□□□ -1.85
CLDN9O95484 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.5□□□□□ -1.85
CLDN9O95484 TMEM248P1-201ENST00000510579 951 ntBASIC3.5□□□□□ -1.85
CLDN9O95484 NDUFB4P9-201ENST00000511646 388 ntBASIC3.5□□□□□ -1.85
CLDN9O95484 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.5□□□□□ -1.85
CLDN9O95484 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms