Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PAX4O43316 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PAX4O43316 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PAX4O43316 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
PAX4O43316 AC005261.2-201ENST00000593427 4258 ntBASIC4.81□□□□□ -1.64
PAX4O43316 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PAX4O43316 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PAX4O43316 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
PAX4O43316 AL596244.1-201ENST00000567068 3779 ntBASIC4.81□□□□□ -1.64
PAX4O43316 EIF2AP4-201ENST00000424793 1781 ntBASIC4.81□□□□□ -1.64
PAX4O43316 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
PAX4O43316 SNX18P3-202ENST00000565670 1750 ntBASIC4.81□□□□□ -1.64
PAX4O43316 AC093909.5-201ENST00000621839 1799 ntBASIC4.81□□□□□ -1.64
PAX4O43316 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PAX4O43316 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PAX4O43316 AC018628.1-201ENST00000624147 3819 ntBASIC4.8□□□□□ -1.64
PAX4O43316 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PAX4O43316 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PAX4O43316 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PAX4O43316 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PAX4O43316 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PAX4O43316 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC4.8□□□□□ -1.64
PAX4O43316 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PAX4O43316 AL121839.2-201ENST00000565058 6943 ntBASIC4.8□□□□□ -1.64
PAX4O43316 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC4.8□□□□□ -1.64
PAX4O43316 Y_RNA.343-201ENST00000365354 112 ntBASIC4.8□□□□□ -1.64
PAX4O43316 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PAX4O43316 MIR27A-201ENST00000385073 78 ntBASIC4.8□□□□□ -1.64
PAX4O43316 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PAX4O43316 AL583834.1-201ENST00000406943 343 ntBASIC4.8□□□□□ -1.64
PAX4O43316 AL139100.1-201ENST00000408001 498 ntBASIC4.8□□□□□ -1.64
PAX4O43316 RNU6-651P-201ENST00000411040 105 ntBASIC4.8□□□□□ -1.64
PAX4O43316 PPIAP23-201ENST00000420099 497 ntBASIC4.8□□□□□ -1.64
PAX4O43316 NMD3P2-201ENST00000421815 761 ntBASIC4.8□□□□□ -1.64
PAX4O43316 BX276092.3-201ENST00000424182 230 ntBASIC4.8□□□□□ -1.64
PAX4O43316 AC091390.2-201ENST00000432573 374 ntBASIC4.8□□□□□ -1.64
PAX4O43316 AL590399.4-201ENST00000436561 601 ntBASIC4.8□□□□□ -1.64
PAX4O43316 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PAX4O43316 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC4.8□□□□□ -1.64
PAX4O43316 TREML3P-201ENST00000457327 501 ntBASIC4.8□□□□□ -1.64
PAX4O43316 FTH1P2-201ENST00000466086 412 ntBASIC4.8□□□□□ -1.64
PAX4O43316 AC015724.1-201ENST00000478577 156 ntBASIC4.8□□□□□ -1.64
PAX4O43316 RPL7AP30-201ENST00000482859 796 ntBASIC4.8□□□□□ -1.64
PAX4O43316 AP001086.1-201ENST00000494882 321 ntBASIC4.8□□□□□ -1.64
PAX4O43316 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.8□□□□□ -1.64
PAX4O43316 RPS27AP18-201ENST00000515536 459 ntBASIC4.8□□□□□ -1.64
PAX4O43316 AC034114.1-201ENST00000520293 285 ntBASIC4.8□□□□□ -1.64
PAX4O43316 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.8□□□□□ -1.64
PAX4O43316 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC4.8□□□□□ -1.64
PAX4O43316 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PAX4O43316 AC009729.1-201ENST00000548873 1133 ntBASIC4.8□□□□□ -1.64
PAX4O43316 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.8□□□□□ -1.64
PAX4O43316 AL591767.3-201ENST00000554632 525 ntBASIC4.8□□□□□ -1.64
PAX4O43316 NPM1P42-201ENST00000560329 862 ntBASIC4.8□□□□□ -1.64
PAX4O43316 NQO1-205ENST00000561500 891 ntTSL 3 BASIC4.8□□□□□ -1.64
PAX4O43316 AC010287.1-201ENST00000566916 357 ntBASIC4.8□□□□□ -1.64
PAX4O43316 AC136932.1-201ENST00000574771 208 ntBASIC4.8□□□□□ -1.64
PAX4O43316 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC4.8□□□□□ -1.64
PAX4O43316 MAGOH2P-202ENST00000584384 429 ntBASIC4.8□□□□□ -1.64
PAX4O43316 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC4.8□□□□□ -1.64
PAX4O43316 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.8□□□□□ -1.64
PAX4O43316 ELOCP5-201ENST00000604924 333 ntBASIC4.8□□□□□ -1.64
PAX4O43316 HMGN2P28-201ENST00000606102 262 ntBASIC4.8□□□□□ -1.64
PAX4O43316 AC103710.2-201ENST00000609912 942 ntBASIC4.8□□□□□ -1.64
PAX4O43316 AC027506.1-201ENST00000621395 198 ntBASIC4.8□□□□□ -1.64
PAX4O43316 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
PAX4O43316 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
PAX4O43316 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
PAX4O43316 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PAX4O43316 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PAX4O43316 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PAX4O43316 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PAX4O43316 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
PAX4O43316 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PAX4O43316 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PAX4O43316 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
PAX4O43316 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PAX4O43316 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
PAX4O43316 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PAX4O43316 AP004289.1-201ENST00000436307 2205 ntBASIC4.8□□□□□ -1.64
PAX4O43316 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PAX4O43316 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PAX4O43316 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PAX4O43316 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PAX4O43316 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PAX4O43316 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PAX4O43316 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PAX4O43316 AL136531.3-201ENST00000624378 3658 ntBASIC4.79□□□□□ -1.64
PAX4O43316 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PAX4O43316 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC4.79□□□□□ -1.64
PAX4O43316 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PAX4O43316 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PAX4O43316 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PAX4O43316 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
PAX4O43316 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PAX4O43316 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PAX4O43316 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PAX4O43316 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PAX4O43316 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PAX4O43316 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms