Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC005156.1-201ENST00000613371 573 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 AL138955.1-201ENST00000622881 1040 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 AC124312.6-202ENST00000623624 418 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.71□□□□□ -1.82
PDLIM1O00151 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.71□□□□□ -1.82
PDLIM1O00151 MIR492-201ENST00000638676 116 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 AC006927.2-201ENST00000639256 389 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
PDLIM1O00151 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
PDLIM1O00151 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PDLIM1O00151 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.71□□□□□ -1.82
PDLIM1O00151 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.71□□□□□ -1.82
PDLIM1O00151 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PDLIM1O00151 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PDLIM1O00151 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
PDLIM1O00151 DCAF13P1-201ENST00000495256 1330 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.7□□□□□ -1.82
PDLIM1O00151 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDLIM1O00151 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDLIM1O00151 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDLIM1O00151 AC016716.1-201ENST00000265882 708 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
PDLIM1O00151 SNORA73.2-201ENST00000364946 201 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 RNU6-356P-201ENST00000384140 107 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 SNORA70C-201ENST00000384538 135 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 RNU6-77P-201ENST00000410554 91 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 RN7SKP33-201ENST00000410942 340 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 RNU6-272P-201ENST00000411028 104 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.7□□□□□ -1.82
PDLIM1O00151 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.7□□□□□ -1.82
PDLIM1O00151 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.7□□□□□ -1.82
PDLIM1O00151 RPL23AP38-201ENST00000423801 469 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.7□□□□□ -1.82
PDLIM1O00151 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.7□□□□□ -1.82
PDLIM1O00151 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.7□□□□□ -1.82
PDLIM1O00151 AC044797.1-201ENST00000445744 679 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.7□□□□□ -1.82
PDLIM1O00151 AC233982.1-201ENST00000451247 436 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 NANOGP10-201ENST00000453325 895 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.7□□□□□ -1.82
PDLIM1O00151 AC010401.1-201ENST00000463867 348 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 RPL7P19-201ENST00000469948 618 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 AC087312.1-201ENST00000471411 480 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDLIM1O00151 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.7□□□□□ -1.82
PDLIM1O00151 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 Vault.1-201ENST00000516474 102 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 RN7SKP96-201ENST00000516948 297 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.7□□□□□ -1.82
PDLIM1O00151 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.7□□□□□ -1.82
PDLIM1O00151 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDLIM1O00151 AP003066.2-201ENST00000529375 555 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.7□□□□□ -1.82
PDLIM1O00151 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.7□□□□□ -1.82
PDLIM1O00151 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.7□□□□□ -1.82
PDLIM1O00151 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.7□□□□□ -1.82
PDLIM1O00151 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.7□□□□□ -1.82
PDLIM1O00151 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.7□□□□□ -1.82
PDLIM1O00151 AC023825.1-201ENST00000566704 1030 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.7□□□□□ -1.82
PDLIM1O00151 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.7□□□□□ -1.82
PDLIM1O00151 RN7SL600P-201ENST00000581811 299 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 AC091488.1-201ENST00000604239 660 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 AC022079.2-201ENST00000619739 566 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 AC091905.1-201ENST00000624400 311 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 AL109659.3-201ENST00000624985 950 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.7□□□□□ -1.82
PDLIM1O00151 OR6C71P-202ENST00000641886 1107 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDLIM1O00151 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.7□□□□□ -1.82
PDLIM1O00151 AC116667.1-201ENST00000604855 2072 ntBASIC3.7□□□□□ -1.82
PDLIM1O00151 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDLIM1O00151 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
PDLIM1O00151 NMD3P1-201ENST00000439704 1488 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PDLIM1O00151 RNU5B-1-201ENST00000363286 116 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 AC234772.1-201ENST00000377927 937 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDLIM1O00151 PRRC2CP1-201ENST00000404428 159 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 AL355143.1-201ENST00000407101 841 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 SNORA57.3-201ENST00000411095 141 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 AL024507.1-201ENST00000412741 274 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 UBE2V1P9-201ENST00000414760 368 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.69□□□□□ -1.82
PDLIM1O00151 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.69□□□□□ -1.82
PDLIM1O00151 AC012497.1-201ENST00000429392 575 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 RPL23AP15-201ENST00000450202 459 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
PDLIM1O00151 AC110768.1-201ENST00000509222 400 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 MTCO1P30-201ENST00000515244 580 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 RN7SKP234-201ENST00000517173 224 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 NDUFB9P3-201ENST00000521269 501 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.69□□□□□ -1.82
PDLIM1O00151 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDLIM1O00151 AP003102.1-201ENST00000525638 661 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.69□□□□□ -1.82
PDLIM1O00151 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.69□□□□□ -1.82
PDLIM1O00151 AC006518.2-201ENST00000542513 940 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.69□□□□□ -1.82
PDLIM1O00151 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms