Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.85□□□□□ -1.95
RBFOX3A6NFN3 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.85□□□□□ -1.95
RBFOX3A6NFN3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC2.85□□□□□ -1.95
RBFOX3A6NFN3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.85□□□□□ -1.95
RBFOX3A6NFN3 MIR6716-201ENST00000613413 80 ntBASIC2.85□□□□□ -1.95
RBFOX3A6NFN3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
RBFOX3A6NFN3 AC024595.1-201ENST00000623088 387 ntBASIC2.85□□□□□ -1.95
RBFOX3A6NFN3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.85□□□□□ -1.95
RBFOX3A6NFN3 ELL2P4-201ENST00000446870 1376 ntBASIC2.85□□□□□ -1.95
RBFOX3A6NFN3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.85□□□□□ -1.95
RBFOX3A6NFN3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 MIR383-201ENST00000362257 73 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 SNORA70.2-201ENST00000364506 135 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 DSTNP4-201ENST00000399472 474 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 TPT1P2-201ENST00000413105 503 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 HMGB3P31-201ENST00000413333 595 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 YWHAZP8-201ENST00000436935 731 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 FABP5P3-201ENST00000437960 408 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 RPS26P56-201ENST00000444468 240 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 NUTF2P3-201ENST00000448540 384 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 MTND5P8-201ENST00000449817 1083 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 RPL23AP23-201ENST00000452590 471 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 NF1P3-201ENST00000457709 450 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 RPS3AP6-201ENST00000484430 795 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 AC041039.1-201ENST00000485656 536 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 AP000563.1-201ENST00000490865 758 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 RNA5SP164-201ENST00000516533 110 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 AC010735.1-201ENST00000567305 1026 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 AC011468.4-201ENST00000603942 409 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 IGHV3-29-201ENST00000604817 344 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 AC015802.5-201ENST00000607478 399 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 AC006023.2-201ENST00000609916 167 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 PLCE1P1-201ENST00000622094 305 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 AC073530.2-201ENST00000623987 261 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 AF001550.2-201ENST00000636643 217 ntBASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.84□□□□□ -1.95
RBFOX3A6NFN3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
RBFOX3A6NFN3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
RBFOX3A6NFN3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
RBFOX3A6NFN3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC2.84□□□□□ -1.96
RBFOX3A6NFN3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.84□□□□□ -1.96
RBFOX3A6NFN3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 SRP72P2-201ENST00000344851 1979 ntBASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 AL359893.1-201ENST00000447628 1580 ntBASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 AC007656.2-201ENST00000624902 4547 ntBASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 ENSAP3-201ENST00000312710 333 ntBASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 U3.11-201ENST00000364476 212 ntBASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 MIR591-201ENST00000385290 95 ntBASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 MTND4P22-201ENST00000413116 1169 ntBASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 TOMM22P1-201ENST00000418578 312 ntBASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 Z97055.1-201ENST00000419730 712 ntBASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 Z74696.2-201ENST00000436514 498 ntBASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 ISCA1P2-201ENST00000438679 421 ntBASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 AC009969.1-201ENST00000438726 172 ntBASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 PRELID3BP5-201ENST00000508612 460 ntBASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 RN7SKP122-201ENST00000515923 296 ntBASIC2.83□□□□□ -1.96
RBFOX3A6NFN3 SNORA70.19-201ENST00000516717 90 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms