Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 MIR30E-201ENST00000362104 92 ntBASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 SNORA73.2-201ENST00000364946 201 ntBASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 OR6K3-202ENST00000368146 996 ntBASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 MTHFD2P2-201ENST00000407725 247 ntBASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 UBE2D3P3-201ENST00000426992 425 ntBASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 RPL21P47-201ENST00000483696 477 ntBASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 MTND4LP31-201ENST00000514859 294 ntBASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 IGKV2-36-201ENST00000519999 223 ntBASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 OR7E13P-201ENST00000526052 910 ntBASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 AP000926.4-201ENST00000527351 454 ntBASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 OR4R2P-201ENST00000530815 597 ntBASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 U6.107-201ENST00000637108 79 ntBASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 AL353743.4-201ENST00000422653 1547 ntBASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
TRAPPC4Q9Y296 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 HSPA8P19-201ENST00000505359 1517 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 MTCO1P18-201ENST00000455518 1419 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 SNORD56.4-201ENST00000363883 71 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 FABP12P1-201ENST00000401911 322 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 RNU2-6P-201ENST00000411404 190 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 AC017079.2-201ENST00000416102 485 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 HMGB3P20-201ENST00000417997 600 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 AC073310.1-201ENST00000423226 1033 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 OR4F13P-201ENST00000428478 931 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 RPL23AP22-201ENST00000437556 453 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 AC010655.1-201ENST00000449336 292 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 RPS4XP2-201ENST00000458402 793 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 AP000873.1-201ENST00000463987 400 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 SETP6-201ENST00000479329 568 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 AC020893.1-201ENST00000502452 580 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 UBE2CP3-201ENST00000502715 450 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 AC021146.5-201ENST00000503544 545 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 SNX5P1-201ENST00000505757 1041 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 OR5H4P-201ENST00000510851 923 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 AC037471.2-201ENST00000564941 598 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 AC106785.1-201ENST00000565935 262 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 AC008507.1-201ENST00000587506 734 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 AC115085.1-201ENST00000588924 229 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 FRG1HP-204ENST00000617940 757 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 AL732618.1-201ENST00000623251 301 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 CR392039.4-201ENST00000624968 501 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 AL732372.2-225ENST00000642124 456 ntBASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRAPPC4Q9Y296 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRAPPC4Q9Y296 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms