Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF6Q9Y252 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF6Q9Y252 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF6Q9Y252 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF6Q9Y252 RNA5SP239-201ENST00000410218 129 ntBASIC3.64□□□□□ -1.83
RNF6Q9Y252 RNA5SP44-201ENST00000410446 133 ntBASIC3.64□□□□□ -1.83
RNF6Q9Y252 AC073264.1-201ENST00000411508 416 ntBASIC3.64□□□□□ -1.83
RNF6Q9Y252 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 RPL30P2-201ENST00000414021 291 ntBASIC3.64□□□□□ -1.83
RNF6Q9Y252 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF6Q9Y252 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 AL035246.1-201ENST00000433554 1255 ntBASIC3.64□□□□□ -1.83
RNF6Q9Y252 AC010881.1-201ENST00000433830 235 ntBASIC3.64□□□□□ -1.83
RNF6Q9Y252 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 AC002542.1-201ENST00000440683 193 ntBASIC3.64□□□□□ -1.83
RNF6Q9Y252 RPS4XP4-201ENST00000443195 763 ntBASIC3.64□□□□□ -1.83
RNF6Q9Y252 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 AL096829.2-201ENST00000446582 742 ntBASIC3.64□□□□□ -1.83
RNF6Q9Y252 AL133547.1-201ENST00000448546 220 ntBASIC3.64□□□□□ -1.83
RNF6Q9Y252 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 DNAJC19P1-201ENST00000455312 319 ntBASIC3.64□□□□□ -1.83
RNF6Q9Y252 RPL7P1-201ENST00000468161 747 ntBASIC3.64□□□□□ -1.83
RNF6Q9Y252 RPL7P9-201ENST00000468715 747 ntBASIC3.64□□□□□ -1.83
RNF6Q9Y252 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF6Q9Y252 SNX5P1-201ENST00000505757 1041 ntBASIC3.64□□□□□ -1.83
RNF6Q9Y252 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 RNU6-488P-201ENST00000515918 99 ntBASIC3.64□□□□□ -1.83
RNF6Q9Y252 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 OR8L1P-201ENST00000534005 955 ntBASIC3.64□□□□□ -1.83
RNF6Q9Y252 AC092451.2-201ENST00000538746 658 ntBASIC3.64□□□□□ -1.83
RNF6Q9Y252 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 AC008739.3-201ENST00000603262 127 ntBASIC3.64□□□□□ -1.83
RNF6Q9Y252 AC112230.1-201ENST00000604342 547 ntBASIC3.64□□□□□ -1.83
RNF6Q9Y252 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 AC124312.6-202ENST00000623624 418 ntBASIC3.64□□□□□ -1.83
RNF6Q9Y252 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF6Q9Y252 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF6Q9Y252 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF6Q9Y252 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF6Q9Y252 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RNF6Q9Y252 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF6Q9Y252 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF6Q9Y252 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF6Q9Y252 SNORA71.3-201ENST00000362582 128 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 RNU6-1151P-201ENST00000384684 107 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 AL009174.1-201ENST00000426577 416 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 UBE2V1P1-201ENST00000430836 445 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RNF6Q9Y252 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 OR51B8P-201ENST00000449892 769 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 RPS15AP1-201ENST00000457423 391 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 RPS4XP15-201ENST00000489210 795 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 NAMPTP2-201ENST00000505629 1115 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 RNU5A-7P-201ENST00000515979 116 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 RNU6-467P-201ENST00000517027 110 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 IGHV3-32-201ENST00000519182 355 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 AC004217.3-201ENST00000551552 878 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 MIR5684-201ENST00000585074 65 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 AP002906.1-201ENST00000603405 233 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 AL390816.3-201ENST00000604527 1066 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 AC009948.4-201ENST00000604692 675 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 AL592436.1-201ENST00000605135 558 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 BRDTP1-201ENST00000605735 677 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 HSPE1P14-201ENST00000605812 302 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 AL354798.1-201ENST00000622505 329 ntBASIC3.63□□□□□ -1.83
RNF6Q9Y252 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RNF6Q9Y252 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms