Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 MTND4P26-201ENST00000415971 1359 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 MAPK10-304ENST00000641341 3984 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 AC099654.2-201ENST00000433031 1980 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 AC016716.1-201ENST00000265882 708 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 RNU4-21P-201ENST00000362802 126 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 SNORA26.8-201ENST00000391306 124 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 LAP3P1-201ENST00000403648 294 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 AL355379.1-201ENST00000405542 640 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 RNA5SP345-201ENST00000410646 108 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 RPS12P5-201ENST00000423449 371 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 AC009965.2-201ENST00000425328 970 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 RPS20P1-201ENST00000434853 354 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 AL353706.1-201ENST00000436728 494 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 ATP5C1P1-201ENST00000441945 895 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 NDUFA5P7-201ENST00000452914 242 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 FGF7P3-201ENST00000454645 303 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 PPIAP21-201ENST00000464473 501 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 MTND3P5-201ENST00000512798 333 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 MTND4LP31-201ENST00000514859 294 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 RN7SKP122-201ENST00000515923 296 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 RN7SKP96-201ENST00000516948 297 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 SMARCE1P4-201ENST00000523647 241 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 SERPINE4P-201ENST00000554978 281 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 AL049839.1-201ENST00000556151 657 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 AC013562.2-201ENST00000611632 603 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 AL022401.1-201ENST00000619498 108 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 AC068831.8-201ENST00000620171 435 ntBASIC4.57□□□□□ -1.68
VPS4AQ9UN37 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS4AQ9UN37 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 AC018529.3-201ENST00000624212 2254 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 AC011155.1-201ENST00000316512 456 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 RNU1-83P-201ENST00000363426 164 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 RNU6-253P-201ENST00000384730 105 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 RNA5SP146-201ENST00000410743 123 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 RN7SKP100-201ENST00000411258 284 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 RPS15AP38-201ENST00000413110 372 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 AL049610.1-201ENST00000423374 372 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 RPL12P34-201ENST00000424532 479 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 IPMKP1-201ENST00000425988 855 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 AC108463.1-201ENST00000450258 347 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 RPL26P28-201ENST00000451325 435 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 TRGVB-201ENST00000453257 471 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 HMGN3P1-201ENST00000453847 193 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 AC006511.1-201ENST00000470614 315 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 AC108078.3-201ENST00000502633 489 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 AC093840.1-201ENST00000511599 336 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 RN7SKP276-201ENST00000516242 268 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 AL512347.1-201ENST00000566420 503 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 ROCK1P1-201ENST00000573767 549 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 RN7SKP299-201ENST00000606679 301 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 AC010424.2-201ENST00000607594 443 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 AP001521.1-201ENST00000609150 300 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 AC067931.1-201ENST00000624190 671 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 AC098679.5-201ENST00000624394 571 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 MAPK10-303ENST00000641324 3959 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
VPS4AQ9UN37 KPNA2P2-201ENST00000419546 1489 ntBASIC4.56□□□□□ -1.68
VPS4AQ9UN37 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms