Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 CYCSP43-201ENST00000438233 310 ntBASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 AL138799.3-201ENST00000438968 350 ntBASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 RPL21P47-201ENST00000483696 477 ntBASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 AC110768.1-201ENST00000509222 400 ntBASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 AP003355.1-201ENST00000518956 587 ntBASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 NF1P5-201ENST00000588287 448 ntBASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 AC011374.2-201ENST00000607135 526 ntBASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 AC055764.2-201ENST00000610089 670 ntBASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 VN1R9P-201ENST00000614184 867 ntBASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 AL391262.2-201ENST00000622466 494 ntBASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 AC024023.1-201ENST00000624530 922 ntBASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 AC119674.1-207ENST00000641355 633 ntBASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 MFSD8-213ENST00000641134 1327 ntBASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
APOBEC3BQ9UH17 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 SAGE2P-201ENST00000420011 2126 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 GTF2H2B-203ENST00000508065 1432 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 RNU6-761P-201ENST00000384148 107 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 RNA5SP424-201ENST00000390988 115 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 PTMAP5-201ENST00000393073 333 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 SOD2P1-201ENST00000396543 562 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 HMGB3P18-201ENST00000406327 590 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 AC013410.2-201ENST00000422627 201 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 RNF2P1-201ENST00000442955 1010 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 AL136097.1-201ENST00000456945 913 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 SNORD105B-201ENST00000458770 79 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 AC078785.3-201ENST00000476607 425 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 AC069499.1-201ENST00000489433 509 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 MIR2114-201ENST00000516645 80 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 AC104115.2-201ENST00000523026 687 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 OR7E13P-201ENST00000526052 910 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 OR5AK3P-201ENST00000527486 1297 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 AC006960.3-201ENST00000561845 705 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 RN7SL339P-201ENST00000580597 296 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 MIR3922-201ENST00000585192 84 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 AL390816.3-201ENST00000604527 1066 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 AC079610.2-201ENST00000604818 690 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 AC018926.1-201ENST00000616335 435 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 AC139769.3-201ENST00000618383 175 ntBASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
APOBEC3BQ9UH17 AC096656.1-201ENST00000623826 1364 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AF127577.6-201ENST00000623352 2191 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 MFSD8-236ENST00000641509 4050 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 SNORD56.4-201ENST00000363883 71 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 RNA5SP72-201ENST00000364442 117 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 RNU6-354P-201ENST00000383862 107 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 RNU6-610P-201ENST00000384264 107 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 MIR183-201ENST00000384958 110 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AC013404.1-201ENST00000413068 249 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 VTA1P1-201ENST00000414044 866 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AC245052.5-201ENST00000416320 649 ntBASIC3.63□□□□□ -1.83
APOBEC3BQ9UH17 AC008173.1-201ENST00000418901 264 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms