Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 snoU13.7-201ENST00000459220 104 ntBASIC3.25□□□□□ -1.89
VAPAQ9P0L0 RPL23AP67-201ENST00000465341 474 ntBASIC3.25□□□□□ -1.89
VAPAQ9P0L0 RN7SKP283-201ENST00000517197 270 ntBASIC3.25□□□□□ -1.89
VAPAQ9P0L0 MIR2116-201ENST00000517221 80 ntBASIC3.25□□□□□ -1.89
VAPAQ9P0L0 AC104027.1-201ENST00000521887 300 ntBASIC3.25□□□□□ -1.89
VAPAQ9P0L0 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.25□□□□□ -1.89
VAPAQ9P0L0 AC004923.2-201ENST00000529649 369 ntBASIC3.25□□□□□ -1.89
VAPAQ9P0L0 AC004024.1-201ENST00000549244 247 ntBASIC3.25□□□□□ -1.89
VAPAQ9P0L0 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.25□□□□□ -1.89
VAPAQ9P0L0 AC007448.1-201ENST00000582714 234 ntBASIC3.25□□□□□ -1.89
VAPAQ9P0L0 AF230666.2-201ENST00000602328 725 ntBASIC3.25□□□□□ -1.89
VAPAQ9P0L0 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.25□□□□□ -1.89
VAPAQ9P0L0 AC242628.1-201ENST00000606810 391 ntBASIC3.25□□□□□ -1.89
VAPAQ9P0L0 AC090912.3-201ENST00000609775 533 ntBASIC3.25□□□□□ -1.89
VAPAQ9P0L0 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VAPAQ9P0L0 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VAPAQ9P0L0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
VAPAQ9P0L0 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 RNA5SP189-201ENST00000364920 115 ntBASIC3.24□□□□□ -1.89
VAPAQ9P0L0 SNORA27.3-201ENST00000364937 134 ntBASIC3.24□□□□□ -1.89
VAPAQ9P0L0 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 RSL24D1P1-201ENST00000404972 493 ntBASIC3.24□□□□□ -1.89
VAPAQ9P0L0 AL355379.1-201ENST00000405542 640 ntBASIC3.24□□□□□ -1.89
VAPAQ9P0L0 RNA5SP107-201ENST00000411358 122 ntBASIC3.24□□□□□ -1.89
VAPAQ9P0L0 AC126124.2-201ENST00000413542 321 ntBASIC3.24□□□□□ -1.89
VAPAQ9P0L0 Z99755.1-201ENST00000414048 380 ntBASIC3.24□□□□□ -1.89
VAPAQ9P0L0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 AL355994.1-201ENST00000424379 260 ntBASIC3.24□□□□□ -1.89
VAPAQ9P0L0 AL035458.1-201ENST00000433096 585 ntBASIC3.24□□□□□ -1.89
VAPAQ9P0L0 AC008264.1-201ENST00000447612 367 ntBASIC3.24□□□□□ -1.89
VAPAQ9P0L0 AC009220.1-201ENST00000451614 275 ntBASIC3.24□□□□□ -1.89
VAPAQ9P0L0 AC108157.1-201ENST00000510511 539 ntBASIC3.24□□□□□ -1.89
VAPAQ9P0L0 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 NOP56P3-201ENST00000549457 385 ntBASIC3.24□□□□□ -1.89
VAPAQ9P0L0 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 AC011816.2-201ENST00000607089 556 ntBASIC3.24□□□□□ -1.89
VAPAQ9P0L0 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 AL359535.1-201ENST00000612100 1087 ntBASIC3.24□□□□□ -1.89
VAPAQ9P0L0 AC048347.1-201ENST00000624621 427 ntBASIC3.24□□□□□ -1.89
VAPAQ9P0L0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.24□□□□□ -1.89
VAPAQ9P0L0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 SNORA31-201ENST00000362607 130 ntBASIC3.23□□□□□ -1.89
VAPAQ9P0L0 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 BX890604.2-201ENST00000427883 474 ntBASIC3.23□□□□□ -1.89
VAPAQ9P0L0 C4BPAP2-201ENST00000428434 478 ntBASIC3.23□□□□□ -1.89
VAPAQ9P0L0 RRM2P4-201ENST00000441721 562 ntBASIC3.23□□□□□ -1.89
VAPAQ9P0L0 AC239367.2-201ENST00000447309 705 ntBASIC3.23□□□□□ -1.89
VAPAQ9P0L0 U3.44-201ENST00000458938 192 ntBASIC3.23□□□□□ -1.89
VAPAQ9P0L0 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 AC008494.2-201ENST00000514544 370 ntBASIC3.23□□□□□ -1.89
VAPAQ9P0L0 SNORA31.13-201ENST00000516624 135 ntBASIC3.23□□□□□ -1.89
VAPAQ9P0L0 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 AC107982.3-201ENST00000584957 985 ntBASIC3.23□□□□□ -1.89
VAPAQ9P0L0 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 AC020763.5-201ENST00000623298 430 ntBASIC3.23□□□□□ -1.89
VAPAQ9P0L0 AC016717.3-201ENST00000624730 554 ntBASIC3.23□□□□□ -1.89
VAPAQ9P0L0 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
VAPAQ9P0L0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.22□□□□□ -1.89
VAPAQ9P0L0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
VAPAQ9P0L0 AC017071.1-201ENST00000564407 2204 ntBASIC3.22□□□□□ -1.89
VAPAQ9P0L0 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VAPAQ9P0L0 MIR141-201ENST00000384975 95 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms