Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC027575.1-201ENST00000481064 460 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 AC005912.1-201ENST00000495392 255 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 KLHL2P1-201ENST00000508691 521 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 AC114797.1-201ENST00000514003 728 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 NARSP2-201ENST00000518524 679 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSU72Q9NP77 LSM3P2-201ENST00000551246 273 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 FRG2DP-202ENST00000566967 323 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 AC008737.2-201ENST00000599446 118 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 RNU6-89P-201ENST00000606519 100 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSU72Q9NP77 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSU72Q9NP77 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSU72Q9NP77 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSU72Q9NP77 MAPK10-338ENST00000641647 3362 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSU72Q9NP77 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSU72Q9NP77 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSU72Q9NP77 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSU72Q9NP77 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSU72Q9NP77 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSU72Q9NP77 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.56□□□□□ -1.52
SSU72Q9NP77 ADAM5-202ENST00000399789 1942 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.56□□□□□ -1.52
SSU72Q9NP77 PWAR1-201ENST00000624188 2414 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.56□□□□□ -1.52
SSU72Q9NP77 ASNSP3-201ENST00000451989 1306 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSU72Q9NP77 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSU72Q9NP77 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SSU72Q9NP77 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.56□□□□□ -1.52
SSU72Q9NP77 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSU72Q9NP77 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SSU72Q9NP77 RNU1-85P-201ENST00000364127 164 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 RNA5SP30-201ENST00000365552 115 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSU72Q9NP77 OR1L6-202ENST00000373684 1044 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSU72Q9NP77 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.56□□□□□ -1.52
SSU72Q9NP77 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SSU72Q9NP77 MIR514A2-201ENST00000385131 88 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 MIR514A3-201ENST00000385132 88 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SSU72Q9NP77 RPL31P52-201ENST00000407532 367 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 AL133384.1-201ENST00000412744 351 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.56□□□□□ -1.52
SSU72Q9NP77 AL161631.1-201ENST00000417933 486 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSU72Q9NP77 AC012512.1-201ENST00000446594 718 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 AC097463.1-201ENST00000447288 481 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.56□□□□□ -1.52
SSU72Q9NP77 RPL36AP55-201ENST00000454114 305 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 AP1S2P1-201ENST00000457344 379 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 AL163540.1-201ENST00000485382 386 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 AK3P4-201ENST00000504283 583 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 AC021146.2-201ENST00000504736 556 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.56□□□□□ -1.52
SSU72Q9NP77 RNU6-1170P-201ENST00000515974 106 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.56□□□□□ -1.52
SSU72Q9NP77 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.56□□□□□ -1.52
SSU72Q9NP77 SUMO2P20-201ENST00000520803 283 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.56□□□□□ -1.52
SSU72Q9NP77 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.56□□□□□ -1.52
SSU72Q9NP77 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.56□□□□□ -1.52
SSU72Q9NP77 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.56□□□□□ -1.52
SSU72Q9NP77 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.56□□□□□ -1.52
SSU72Q9NP77 POLR3GP2-201ENST00000588366 668 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 AC006116.10-201ENST00000591836 581 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 VN1R84P-201ENST00000593697 235 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 AC087763.1-201ENST00000603391 286 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 AC108738.1-201ENST00000603703 237 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 AL627309.6-201ENST00000606857 840 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 MIR6885-201ENST00000612241 66 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.56□□□□□ -1.52
SSU72Q9NP77 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.56□□□□□ -1.52
SSU72Q9NP77 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.56□□□□□ -1.52
SSU72Q9NP77 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.56□□□□□ -1.52
SSU72Q9NP77 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSU72Q9NP77 MTND5P16-201ENST00000460269 1703 ntBASIC5.56□□□□□ -1.52
SSU72Q9NP77 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSU72Q9NP77 GTF2IP4-201ENST00000453092 2054 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSU72Q9NP77 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSU72Q9NP77 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.55□□□□□ -1.52
SSU72Q9NP77 AC007842.1-201ENST00000597336 2039 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 AC073136.1-201ENST00000449426 2884 ntBASIC5.55□□□□□ -1.52
SSU72Q9NP77 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSU72Q9NP77 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms