Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC093278.1-201ENST00000494700 600 ntBASIC3.17□□□□□ -1.9
HMG20AQ9NP66 RN7SL323P-201ENST00000494712 295 ntBASIC3.17□□□□□ -1.9
HMG20AQ9NP66 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.17□□□□□ -1.9
HMG20AQ9NP66 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.17□□□□□ -1.9
HMG20AQ9NP66 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.17□□□□□ -1.9
HMG20AQ9NP66 AC010468.3-201ENST00000508225 458 ntBASIC3.17□□□□□ -1.9
HMG20AQ9NP66 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.17□□□□□ -1.9
HMG20AQ9NP66 AC010265.1-201ENST00000513509 211 ntBASIC3.17□□□□□ -1.9
HMG20AQ9NP66 MTCO1P35-201ENST00000515270 228 ntBASIC3.17□□□□□ -1.9
HMG20AQ9NP66 RNU2-58P-201ENST00000516403 183 ntBASIC3.17□□□□□ -1.9
HMG20AQ9NP66 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.17□□□□□ -1.9
HMG20AQ9NP66 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.17□□□□□ -1.9
HMG20AQ9NP66 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HMG20AQ9NP66 CYCSP30-201ENST00000546447 172 ntBASIC3.17□□□□□ -1.9
HMG20AQ9NP66 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.17□□□□□ -1.9
HMG20AQ9NP66 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.17□□□□□ -1.9
HMG20AQ9NP66 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.17□□□□□ -1.9
HMG20AQ9NP66 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.17□□□□□ -1.9
HMG20AQ9NP66 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.17□□□□□ -1.9
HMG20AQ9NP66 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.17□□□□□ -1.9
HMG20AQ9NP66 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
HMG20AQ9NP66 KATNBL1P5-201ENST00000605015 517 ntBASIC3.17□□□□□ -1.9
HMG20AQ9NP66 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.17□□□□□ -1.9
HMG20AQ9NP66 MIR378J-201ENST00000611988 109 ntBASIC3.17□□□□□ -1.9
HMG20AQ9NP66 AP003072.4-201ENST00000624580 310 ntBASIC3.17□□□□□ -1.9
HMG20AQ9NP66 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.17□□□□□ -1.9
HMG20AQ9NP66 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
HMG20AQ9NP66 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HMG20AQ9NP66 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HMG20AQ9NP66 AL356274.2-201ENST00000624379 3752 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 RPL7P26-201ENST00000333817 754 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 RNU4-31P-201ENST00000384211 141 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 ATF1P1-201ENST00000406040 927 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 MTND4P22-201ENST00000413116 1169 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 AC006960.1-201ENST00000419980 153 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 COX6CP17-201ENST00000421389 185 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 RPS27AP12-201ENST00000429552 465 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 AC097499.1-201ENST00000444277 208 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 H2AFZP6-201ENST00000444403 394 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 TPT1P12-201ENST00000448968 492 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 AL353718.1-201ENST00000451028 517 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 CEACAMP10-202ENST00000495431 496 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 AC010460.1-201ENST00000507087 466 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 MIR2116-201ENST00000517221 80 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 OR8K2P-201ENST00000524645 927 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 OR5AK3P-201ENST00000527486 1297 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 AP003168.1-201ENST00000530091 307 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 MTND4LP24-201ENST00000572277 291 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 AC011374.2-201ENST00000607135 526 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 AL355816.1-201ENST00000607951 118 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 AL162574.2-201ENST00000614618 657 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 PLCE1P1-201ENST00000622094 305 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 MAPK10-362ENST00000641864 4484 ntBASIC3.16□□□□□ -1.9
HMG20AQ9NP66 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMG20AQ9NP66 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HMG20AQ9NP66 AC007656.2-201ENST00000624902 4547 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 RNA5SP283-201ENST00000365604 119 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 RNU6-650P-201ENST00000365658 111 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 HMGB1P10-201ENST00000395823 563 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 HMGB1P13-201ENST00000406019 642 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 MIR1303-201ENST00000408625 86 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 RN7SKP123-201ENST00000410732 291 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 RN7SKP58-201ENST00000411010 305 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 AL158825.1-201ENST00000414735 521 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 TCEA1P4-201ENST00000415066 844 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HMG20AQ9NP66 RSL24D1P6-201ENST00000426934 401 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 MTATP6P11-201ENST00000428071 670 ntBASIC3.15□□□□□ -1.91
HMG20AQ9NP66 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms