Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 HMGN1P14-201ENST00000412459 517 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 HMGB3P23-201ENST00000414981 585 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 RPL7P30-201ENST00000420888 709 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 MTATP6P23-201ENST00000440153 476 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 NANOGNBP1-201ENST00000448444 480 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AC009127.1-201ENST00000467090 155 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AC083982.1-201ENST00000485679 344 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 RPL7P24-201ENST00000493052 752 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AC023424.2-201ENST00000493479 777 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 RN7SL591P-201ENST00000496150 292 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AL358832.1-201ENST00000497800 389 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AC114981.1-201ENST00000503897 678 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AC010350.1-201ENST00000504908 231 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 POU5F1P7-201ENST00000508759 541 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 RNU6-506P-201ENST00000516553 94 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AP004247.1-201ENST00000531556 1289 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AC074050.1-201ENST00000563247 211 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AC011447.4-201ENST00000587562 111 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 BNIP3P23-201ENST00000599655 511 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AC104687.2-201ENST00000604442 342 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AC097468.3-201ENST00000607956 456 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AL355073.2-201ENST00000612106 557 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 uc_338.18-201ENST00000615451 175 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AC108751.5-201ENST00000492880 1336 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AC009643.2-201ENST00000603543 1448 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 MTND5P26-201ENST00000426018 1752 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 RNU6-297P-201ENST00000384636 107 ntBASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 MIR141-201ENST00000384975 95 ntBASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AL121972.1-201ENST00000402023 252 ntBASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 MIR320C1-201ENST00000408566 88 ntBASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 MIR548F1-201ENST00000408667 84 ntBASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 Y_RNA.598-201ENST00000410480 95 ntBASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 USP9YP13-201ENST00000417797 480 ntBASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AC245028.1-201ENST00000423259 256 ntBASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 RGS17P1-201ENST00000423358 553 ntBASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AC009965.2-201ENST00000425328 970 ntBASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AL356583.2-201ENST00000426536 280 ntBASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 Z80107.2-201ENST00000445127 392 ntBASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AC243772.1-201ENST00000451620 410 ntBASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 BX284632.1-201ENST00000478218 541 ntBASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AC004924.1-201ENST00000480160 781 ntBASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AC021242.1-201ENST00000507315 2035 ntBASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AC093809.1-201ENST00000509155 340 ntBASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 OR5M2P-201ENST00000529003 936 ntBASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AC068587.4-201ENST00000533893 186 ntBASIC4.59□□□□□ -1.67
AMBRA1Q9C0C7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 191.9 ms