Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC063943.1-201ENST00000465434 453 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 RPS15AP17-201ENST00000470598 390 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 IGLV2-34-201ENST00000490007 283 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 AC106872.3-201ENST00000495104 446 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 AC091868.1-201ENST00000508746 304 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 AC018797.3-201ENST00000513388 1241 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 AP004247.1-201ENST00000531556 1289 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 MIR4504-201ENST00000577413 92 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 MIR548AB-201ENST00000584917 84 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 AP000403.1-201ENST00000603349 851 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 SEPT7P9-203ENST00000604116 343 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 AL031320.1-201ENST00000604177 357 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 AL159169.3-201ENST00000608871 561 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 AC100827.5-201ENST00000615883 426 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 AC005332.5-201ENST00000591222 2919 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 AC107027.3-201ENST00000565095 3473 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 RNA5SP191-201ENST00000362585 102 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 RNU5E-5P-201ENST00000365379 116 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 ZNF603P-201ENST00000405613 487 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 RN7SKP33-201ENST00000410942 340 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 RPS3AP9-201ENST00000417027 792 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 OR2B7P-201ENST00000429302 934 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 MTATP6P13-201ENST00000438531 667 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AC104651.2-201ENST00000447549 528 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 OR1H1P-201ENST00000448731 937 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 TRBV26-201ENST00000456572 344 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 RPL7P22-201ENST00000466005 733 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 OR52A4P-201ENST00000472867 958 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 MTND6P6-201ENST00000478031 263 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AC005726.1-201ENST00000494679 427 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 FTH1P24-201ENST00000503502 462 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AC010460.1-201ENST00000507087 466 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 FABP5P5-201ENST00000515537 406 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 RN7SKP298-201ENST00000515950 94 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AP001880.2-201ENST00000538233 448 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AGGF1P8-201ENST00000562979 1000 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AL121834.1-201ENST00000572284 509 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 MIR3667-201ENST00000581025 74 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AL512782.1-201ENST00000603093 364 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AL008729.2-201ENST00000606393 473 ntBASIC4.43□□□□□ -1.7
CTHRC1Q96CG8 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms