Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.04□□□□□ -1.76
VPS33AQ96AX1 AC010608.3-201ENST00000625048 527 ntBASIC4.04□□□□□ -1.76
VPS33AQ96AX1 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS33AQ96AX1 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS33AQ96AX1 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS33AQ96AX1 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS33AQ96AX1 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS33AQ96AX1 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
VPS33AQ96AX1 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS33AQ96AX1 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
VPS33AQ96AX1 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 Y_RNA.25-201ENST00000362528 102 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 RNU6-657P-201ENST00000383904 107 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 SNORD116-12-201ENST00000384468 92 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 SNORA37-201ENST00000384504 129 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 RNU6-821P-201ENST00000390995 107 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 RNA5SP332-201ENST00000391063 115 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 RPL7P53-201ENST00000421245 739 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 MRPS36P1-201ENST00000421291 307 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 RPL7P44-201ENST00000424827 742 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 RPL21P112-201ENST00000434403 463 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 AC127537.2-201ENST00000439258 465 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 RPL23AP52-201ENST00000439311 478 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 AC108734.3-201ENST00000481241 1165 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 RPL31P13-201ENST00000484151 370 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 IGKV2D-23-201ENST00000518179 286 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 MTCYBP41-201ENST00000528913 1123 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 AC125611.1-201ENST00000549563 229 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 MTND3P13-201ENST00000574391 343 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 MIR4270-201ENST00000581799 70 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 AC021749.1-201ENST00000604322 607 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 AL049634.3-201ENST00000604968 457 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 AC024933.1-201ENST00000608472 348 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 AP001521.1-201ENST00000609150 300 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 LINC02211-204ENST00000642024 1070 ntBASIC4.03□□□□□ -1.76
VPS33AQ96AX1 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS33AQ96AX1 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC107982.1-201ENST00000507171 1300 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 NUP58P1-201ENST00000502546 1738 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 OR5P1P-201ENST00000299512 925 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 RNU6-263P-201ENST00000363811 107 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 SNORD82-201ENST00000365530 70 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 MIR607-201ENST00000385241 96 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AL583834.1-201ENST00000406943 343 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 SNORA3C-201ENST00000408792 125 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 RN7SKP56-201ENST00000410513 331 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 MTATP6P20-201ENST00000414147 562 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 ARL2BPP10-201ENST00000446487 531 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 RAD23BP3-201ENST00000454157 1152 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 RFC5P1-201ENST00000454419 874 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 RN7SL826P-201ENST00000479724 288 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS33AQ96AX1 AC020593.1-201ENST00000507399 299 ntBASIC4.02□□□□□ -1.77
VPS33AQ96AX1 RNU6-1225P-201ENST00000516336 65 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms