Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MIR5708-201ENST00000579723 85 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
PTP4A1Q93096 AC008782.1-201ENST00000603386 430 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 BNIP3P31-201ENST00000604515 566 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 AL163642.2-201ENST00000604722 1019 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 AC019193.2-201ENST00000610012 634 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 RN7SL722P-201ENST00000617780 284 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 RN7SL565P-201ENST00000618246 284 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 AC092184.1-201ENST00000625042 715 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.84□□□□□ -1.79
PTP4A1Q93096 CYP3A51P-201ENST00000633513 256 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.84□□□□□ -1.79
PTP4A1Q93096 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.84□□□□□ -1.79
PTP4A1Q93096 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PTP4A1Q93096 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
PTP4A1Q93096 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PTP4A1Q93096 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.84□□□□□ -1.8
PTP4A1Q93096 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
PTP4A1Q93096 RAD17P1-201ENST00000418130 2042 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.83□□□□□ -1.8
PTP4A1Q93096 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTP4A1Q93096 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTP4A1Q93096 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.83□□□□□ -1.8
PTP4A1Q93096 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTP4A1Q93096 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTP4A1Q93096 RNA5SP295-201ENST00000362655 121 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 RNA5SP505-201ENST00000364748 108 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTP4A1Q93096 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.83□□□□□ -1.8
PTP4A1Q93096 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
PTP4A1Q93096 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PTP4A1Q93096 MIR937-201ENST00000401271 86 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 MTCO1P56-201ENST00000401674 224 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 RHEBP3-201ENST00000411920 351 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.83□□□□□ -1.8
PTP4A1Q93096 AC092647.1-201ENST00000420654 287 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.83□□□□□ -1.8
PTP4A1Q93096 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.83□□□□□ -1.8
PTP4A1Q93096 AC245028.1-201ENST00000423259 256 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 EIF1P3-201ENST00000423841 334 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTP4A1Q93096 RPL23AP1-201ENST00000428990 471 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 RPL23AP89-201ENST00000439324 255 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 HMGB1P15-201ENST00000453854 435 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 CFTRP1-201ENST00000456646 183 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 snoU13.4-201ENST00000458916 104 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 AC006517.1-201ENST00000480485 328 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 AC025554.1-201ENST00000505641 188 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 AC093720.1-201ENST00000505681 714 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.83□□□□□ -1.8
PTP4A1Q93096 AC111000.3-201ENST00000508057 576 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTP4A1Q93096 RNA5SP468-201ENST00000516782 93 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.83□□□□□ -1.8
PTP4A1Q93096 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTP4A1Q93096 AC090502.2-201ENST00000549267 280 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.83□□□□□ -1.8
PTP4A1Q93096 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.83□□□□□ -1.8
PTP4A1Q93096 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.83□□□□□ -1.8
PTP4A1Q93096 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.83□□□□□ -1.8
PTP4A1Q93096 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.83□□□□□ -1.8
PTP4A1Q93096 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.83□□□□□ -1.8
PTP4A1Q93096 AC115286.1-201ENST00000604298 434 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 AL354984.3-201ENST00000604803 325 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 AC055876.5-201ENST00000605667 259 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 AC253576.2-201ENST00000618815 580 ntBASIC3.83□□□□□ -1.8
PTP4A1Q93096 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.83□□□□□ -1.8
PTP4A1Q93096 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTP4A1Q93096 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.83□□□□□ -1.8
PTP4A1Q93096 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTP4A1Q93096 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTP4A1Q93096 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
PTP4A1Q93096 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTP4A1Q93096 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTP4A1Q93096 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTP4A1Q93096 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
PTP4A1Q93096 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTP4A1Q93096 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTP4A1Q93096 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PTP4A1Q93096 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTP4A1Q93096 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTP4A1Q93096 MIR331-201ENST00000362302 94 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.82□□□□□ -1.8
PTP4A1Q93096 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTP4A1Q93096 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTP4A1Q93096 MIR129-1-201ENST00000384972 72 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PTP4A1Q93096 SNORA11F-201ENST00000408237 128 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 RN7SKP56-201ENST00000410513 331 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 RPL23AP26-201ENST00000412728 464 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 TMSB10P2-201ENST00000416049 131 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.82□□□□□ -1.8
PTP4A1Q93096 AL356387.2-201ENST00000422272 243 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 BMS1P19-201ENST00000433925 393 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 SEPT7P5-201ENST00000434048 306 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.82□□□□□ -1.8
PTP4A1Q93096 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.82□□□□□ -1.8
PTP4A1Q93096 AF228730.2-201ENST00000438784 848 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 AL662791.1-201ENST00000441992 928 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms