Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC119744.1-201ENST00000454746 1715 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 SNORA4.1-201ENST00000364263 144 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 OR5H15-201ENST00000383696 930 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 RNA5SP87-201ENST00000384155 118 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 RNU1-44P-201ENST00000384453 163 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 MIR298-201ENST00000401212 88 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 TMSB4XP8-201ENST00000402089 135 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AL049697.2-201ENST00000403708 294 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 VN1R8P-201ENST00000407739 893 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 RNU2-50P-201ENST00000410494 143 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 RPL7P8-201ENST00000411964 730 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 TMSB4XP6-201ENST00000415187 135 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC062016.2-201ENST00000420950 676 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC006366.1-201ENST00000422002 759 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 TMSB4XP1-201ENST00000424567 135 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 CENPIP1-201ENST00000425713 902 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 NPM1P24-201ENST00000428039 894 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 RPS25P9-201ENST00000435591 252 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 MTND4P6-201ENST00000438297 472 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC092013.1-201ENST00000438795 332 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 RPL7P59-201ENST00000447700 943 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 CEACAMP6-201ENST00000452007 574 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 RPL32P9-201ENST00000487963 407 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC104685.1-201ENST00000502445 371 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC083829.1-201ENST00000503756 657 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC008494.2-201ENST00000514544 370 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 RNA5SP135-201ENST00000517019 125 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 RN7SKP283-201ENST00000517197 270 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC008562.1-201ENST00000521763 330 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 IFITM8P-201ENST00000522529 394 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 SMARCE1P4-201ENST00000523647 241 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC004217.3-201ENST00000551552 878 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC051619.2-201ENST00000559063 397 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AGGF1P4-201ENST00000568249 801 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC004987.4-201ENST00000603383 338 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AL160290.3-201ENST00000604869 165 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC004492.1-201ENST00000607036 742 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 FAM25E-202ENST00000608562 189 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AL138721.1-201ENST00000616756 179 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 MIR4727-201ENST00000622232 55 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC092184.1-201ENST00000625042 715 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AC127502.3-201ENST00000636170 1206 ntBASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLIP4Q8N3C7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 RNU6-500P-201ENST00000362349 107 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 Y_RNA.553-201ENST00000384670 102 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AL133264.1-201ENST00000407157 562 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 RPL23AP47-201ENST00000408017 460 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 RPL6P29-201ENST00000414863 865 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AL049610.1-201ENST00000423374 372 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 RPL31P54-201ENST00000429803 370 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 GEMIN8P3-201ENST00000445417 720 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AC010326.1-201ENST00000462726 602 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AC072039.1-201ENST00000477611 581 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 RN7SL826P-201ENST00000479724 288 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AC008897.1-201ENST00000494006 347 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms