Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SETP14-201ENST00000497538 873 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 RNF138P1-201ENST00000502765 546 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AC010460.1-201ENST00000507087 466 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AC104057.1-201ENST00000515547 497 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 MTND2P26-201ENST00000528255 1029 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AC087465.1-201ENST00000560574 245 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AC138915.2-201ENST00000569776 97 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 OR4K7P-201ENST00000580232 945 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AC133552.5-201ENST00000604266 540 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AC090246.1-201ENST00000616499 426 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AC099669.2-201ENST00000616549 437 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AC039056.2-201ENST00000622261 511 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AC073348.1-201ENST00000623002 331 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 BMS1P21-201ENST00000634565 365 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 MIR4496-201ENST00000635896 61 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 SCN1A-220ENST00000641603 12506 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AL139811.1-201ENST00000424779 2299 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 RNU1-83P-201ENST00000363426 164 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 SNORD46.1-201ENST00000364139 104 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 Y_RNA.333-201ENST00000365274 102 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 RNU6-921P-201ENST00000384361 107 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 MIR506-201ENST00000384998 124 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 AL023807.1-201ENST00000407932 359 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 RNA5SP80-201ENST00000410475 111 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 AL139421.1-201ENST00000423010 169 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 RPL23AP16-201ENST00000441715 421 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 HMGB3P9-201ENST00000441799 583 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 AL512326.1-201ENST00000443050 721 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 NECAP1P2-201ENST00000455668 727 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 MTCO3P2-201ENST00000457365 171 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 MTND1P16-201ENST00000465177 898 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 RPL23AP2-201ENST00000471227 466 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 MTND2P14-201ENST00000482139 351 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 DEFB109F-201ENST00000491870 277 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 RN7SL812P-201ENST00000493791 279 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 AC091951.3-201ENST00000504093 246 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 AC079395.1-201ENST00000510981 262 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 AC021146.3-201ENST00000511911 260 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 KCTD9P2-201ENST00000512203 1013 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 AC099522.1-202ENST00000514718 367 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 RNA5SP519-201ENST00000516480 119 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 PDCD5P1-201ENST00000543528 309 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 DPRXP5-201ENST00000604662 539 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HERC6Q8IVU3 AL133243.3-201ENST00000617415 3004 ntBASIC4.7□□□□□ -1.66
HERC6Q8IVU3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms