Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
VRK3Q8IV63 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VRK3Q8IV63 THAP12P5-201ENST00000405864 2275 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 MUC2-202ENST00000613187 4845 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VRK3Q8IV63 Y_RNA.573-201ENST00000384763 105 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 RPL23AP29-201ENST00000397284 453 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 RPL21P111-201ENST00000418453 477 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 AC073464.1-201ENST00000429823 534 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 MTCYBP45-201ENST00000435243 565 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 SLC25A18P1-201ENST00000449385 454 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 HIGD1AP8-201ENST00000453927 274 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 RPS3AP41-201ENST00000462701 778 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 AC112206.1-201ENST00000468416 477 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 IGLV2-34-201ENST00000490007 283 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 HMGN1P12-201ENST00000499125 195 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 ARL4AP2-201ENST00000507378 601 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 RPL7L1P13-201ENST00000511702 739 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 AC024589.1-201ENST00000512207 263 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 RNA5SP249-201ENST00000516127 99 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 RNY4P37-201ENST00000516225 96 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 Y_RNA.719-201ENST00000517156 106 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 AC239860.2-201ENST00000525886 270 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 OR6C73P-201ENST00000546432 358 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 AL390726.5-202ENST00000564800 256 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 AL031320.1-201ENST00000604177 357 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 AC008277.2-201ENST00000605196 797 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 AL121932.1-201ENST00000605542 214 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 AC103710.1-201ENST00000610003 901 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 AC055764.2-201ENST00000610089 670 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 AC079228.1-201ENST00000624774 1049 ntBASIC4.73□□□□□ -1.65
VRK3Q8IV63 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VRK3Q8IV63 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
VRK3Q8IV63 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VRK3Q8IV63 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
VRK3Q8IV63 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VRK3Q8IV63 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.73□□□□□ -1.65
VRK3Q8IV63 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
VRK3Q8IV63 AC083843.2-201ENST00000568248 6253 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VRK3Q8IV63 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 TLK1P1-201ENST00000456760 2440 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
VRK3Q8IV63 RNU4-7P-201ENST00000364758 141 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 RNU6-534P-201ENST00000364877 106 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VRK3Q8IV63 SUGT1P1-201ENST00000379514 476 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 RPL23AP47-201ENST00000408017 460 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 RN7SKP125-201ENST00000410481 302 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 TMBIM7P-201ENST00000418074 855 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 AC069157.1-201ENST00000421749 137 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VRK3Q8IV63 AC104837.2-201ENST00000427236 424 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 AC007559.1-201ENST00000428736 355 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 ZYG11AP1-201ENST00000430329 837 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 LYPLA1P1-201ENST00000434514 622 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 RPS17P8-201ENST00000434525 335 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 AL935212.3-201ENST00000450729 284 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 snoU109.1-201ENST00000459339 135 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 AC063943.1-201ENST00000465434 453 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 RNF138P1-201ENST00000502765 546 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 AC009646.1-201ENST00000510455 318 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 MTCYBP43-201ENST00000513621 740 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 OR5M7P-201ENST00000526140 972 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 AP001893.2-201ENST00000526949 202 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 AP001922.4-201ENST00000526967 290 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 495.6 ms