Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.4□□□□□ -2.03
VPS13CQ709C8 AC009097.3-201ENST00000563557 1018 ntBASIC2.4□□□□□ -2.03
VPS13CQ709C8 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VPS13CQ709C8 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.03
VPS13CQ709C8 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
VPS13CQ709C8 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.4□□□□□ -2.03
VPS13CQ709C8 RNU2-52P-201ENST00000410680 190 ntBASIC2.39□□□□□ -2.03
VPS13CQ709C8 AC117434.1-201ENST00000419971 836 ntBASIC2.39□□□□□ -2.03
VPS13CQ709C8 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.39□□□□□ -2.03
VPS13CQ709C8 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VPS13CQ709C8 MIR4738-201ENST00000579134 87 ntBASIC2.39□□□□□ -2.03
VPS13CQ709C8 AC016727.1-205ENST00000605437 569 ntBASIC2.39□□□□□ -2.03
VPS13CQ709C8 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
VPS13CQ709C8 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
VPS13CQ709C8 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VPS13CQ709C8 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VPS13CQ709C8 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.39□□□□□ -2.03
VPS13CQ709C8 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
VPS13CQ709C8 RNA5SP289-201ENST00000362332 137 ntBASIC2.39□□□□□ -2.03
VPS13CQ709C8 RNU6-283P-201ENST00000364788 107 ntBASIC2.39□□□□□ -2.03
VPS13CQ709C8 SEPT7P6-201ENST00000469999 1143 ntBASIC2.39□□□□□ -2.03
VPS13CQ709C8 AC114967.1-201ENST00000504890 259 ntBASIC2.39□□□□□ -2.03
VPS13CQ709C8 AC005351.1-201ENST00000511152 786 ntBASIC2.39□□□□□ -2.03
VPS13CQ709C8 AC243972.3-201ENST00000539655 198 ntBASIC2.39□□□□□ -2.03
VPS13CQ709C8 AC099489.2-201ENST00000574976 260 ntBASIC2.39□□□□□ -2.03
VPS13CQ709C8 AC099506.2-201ENST00000623074 221 ntBASIC2.39□□□□□ -2.03
VPS13CQ709C8 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC2.39□□□□□ -2.03
VPS13CQ709C8 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
VPS13CQ709C8 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
VPS13CQ709C8 MIR489-201ENST00000384923 84 ntBASIC2.39□□□□□ -2.03
VPS13CQ709C8 RPL7P8-201ENST00000411964 730 ntBASIC2.39□□□□□ -2.03
VPS13CQ709C8 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS13CQ709C8 HMGB3P6-201ENST00000444896 598 ntBASIC2.39□□□□□ -2.03
VPS13CQ709C8 CKS1BP2-201ENST00000497342 240 ntBASIC2.39□□□□□ -2.03
VPS13CQ709C8 KLHL2P1-201ENST00000508691 521 ntBASIC2.39□□□□□ -2.03
VPS13CQ709C8 AC008837.1-201ENST00000511513 412 ntBASIC2.39□□□□□ -2.03
VPS13CQ709C8 AP001004.1-201ENST00000582468 324 ntBASIC2.39□□□□□ -2.03
VPS13CQ709C8 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VPS13CQ709C8 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
VPS13CQ709C8 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VPS13CQ709C8 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VPS13CQ709C8 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.39□□□□□ -2.03
VPS13CQ709C8 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS13CQ709C8 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.38□□□□□ -2.03
VPS13CQ709C8 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS13CQ709C8 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.38□□□□□ -2.03
VPS13CQ709C8 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS13CQ709C8 AC012123.2-201ENST00000485809 248 ntBASIC2.38□□□□□ -2.03
VPS13CQ709C8 AC108210.2-201ENST00000503681 201 ntBASIC2.38□□□□□ -2.03
VPS13CQ709C8 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS13CQ709C8 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.38□□□□□ -2.03
VPS13CQ709C8 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.38□□□□□ -2.03
VPS13CQ709C8 AL354950.1-201ENST00000614150 568 ntBASIC2.38□□□□□ -2.03
VPS13CQ709C8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VPS13CQ709C8 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
VPS13CQ709C8 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VPS13CQ709C8 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VPS13CQ709C8 RNVU1-3-201ENST00000364313 161 ntBASIC2.38□□□□□ -2.03
VPS13CQ709C8 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VPS13CQ709C8 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC2.38□□□□□ -2.03
VPS13CQ709C8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS13CQ709C8 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.38□□□□□ -2.03
VPS13CQ709C8 Z99127.3-201ENST00000448158 395 ntBASIC2.38□□□□□ -2.03
VPS13CQ709C8 AC008280.2-201ENST00000455473 307 ntBASIC2.38□□□□□ -2.03
VPS13CQ709C8 TRBV8-2-201ENST00000475637 270 ntBASIC2.38□□□□□ -2.03
VPS13CQ709C8 AC078817.1-201ENST00000492623 435 ntBASIC2.38□□□□□ -2.03
VPS13CQ709C8 AC124856.1-201ENST00000600819 896 ntBASIC2.38□□□□□ -2.03
VPS13CQ709C8 AC025811.1-201ENST00000604312 472 ntBASIC2.38□□□□□ -2.03
VPS13CQ709C8 MIR6817-201ENST00000615588 66 ntBASIC2.38□□□□□ -2.03
VPS13CQ709C8 AC092184.1-201ENST00000625042 715 ntBASIC2.38□□□□□ -2.03
VPS13CQ709C8 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
VPS13CQ709C8 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
VPS13CQ709C8 ZNF658B-202ENST00000615961 3375 ntBASIC2.38□□□□□ -2.03
VPS13CQ709C8 Y_RNA.40-201ENST00000362645 93 ntBASIC2.38□□□□□ -2.03
VPS13CQ709C8 AL356057.3-201ENST00000402607 340 ntBASIC2.38□□□□□ -2.03
VPS13CQ709C8 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VPS13CQ709C8 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS13CQ709C8 AC021205.1-201ENST00000468797 348 ntBASIC2.38□□□□□ -2.03
VPS13CQ709C8 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.38□□□□□ -2.03
VPS13CQ709C8 IGHV3-63-201ENST00000518422 341 ntBASIC2.38□□□□□ -2.03
VPS13CQ709C8 MYL12AP1-201ENST00000518490 515 ntBASIC2.38□□□□□ -2.03
VPS13CQ709C8 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC2.38□□□□□ -2.03
VPS13CQ709C8 AC078814.3-201ENST00000553036 491 ntBASIC2.38□□□□□ -2.03
VPS13CQ709C8 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC2.38□□□□□ -2.03
VPS13CQ709C8 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC2.38□□□□□ -2.03
VPS13CQ709C8 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC2.38□□□□□ -2.03
VPS13CQ709C8 DDX18P3-201ENST00000404856 2007 ntBASIC2.38□□□□□ -2.03
VPS13CQ709C8 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
VPS13CQ709C8 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VPS13CQ709C8 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VPS13CQ709C8 MIR7-2-201ENST00000384970 110 ntBASIC2.37□□□□□ -2.03
VPS13CQ709C8 AC110754.1-201ENST00000399740 601 ntBASIC2.37□□□□□ -2.03
VPS13CQ709C8 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.37□□□□□ -2.03
VPS13CQ709C8 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.37□□□□□ -2.03
VPS13CQ709C8 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC2.37□□□□□ -2.03
VPS13CQ709C8 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.37□□□□□ -2.03
VPS13CQ709C8 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.37□□□□□ -2.03
VPS13CQ709C8 TOPORSLP1-201ENST00000467693 2102 ntBASIC2.37□□□□□ -2.03
VPS13CQ709C8 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VPS13CQ709C8 RPS3AP26-201ENST00000398259 784 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms