Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.46□□□□□ -1.7
PTCHD4Q6ZW05 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PTCHD4Q6ZW05 AC126915.2-201ENST00000610957 190 ntBASIC4.46□□□□□ -1.7
PTCHD4Q6ZW05 AC027807.2-201ENST00000616099 408 ntBASIC4.46□□□□□ -1.7
PTCHD4Q6ZW05 AC138932.5-201ENST00000617759 563 ntBASIC4.46□□□□□ -1.7
PTCHD4Q6ZW05 RNU6-156P-201ENST00000621869 107 ntBASIC4.46□□□□□ -1.7
PTCHD4Q6ZW05 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.46□□□□□ -1.7
PTCHD4Q6ZW05 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.46□□□□□ -1.7
PTCHD4Q6ZW05 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTCHD4Q6ZW05 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTCHD4Q6ZW05 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PTCHD4Q6ZW05 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.46□□□□□ -1.7
PTCHD4Q6ZW05 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.46□□□□□ -1.7
PTCHD4Q6ZW05 AL139811.1-201ENST00000424779 2299 ntBASIC4.46□□□□□ -1.7
PTCHD4Q6ZW05 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.46□□□□□ -1.7
PTCHD4Q6ZW05 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PTCHD4Q6ZW05 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 RNU6-348P-201ENST00000384386 107 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 SNORD96B-201ENST00000386148 79 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 RPS27AP14-201ENST00000422868 454 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC104651.1-201ENST00000427559 735 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AL391987.1-201ENST00000441025 200 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 KNOP1P3-201ENST00000446933 426 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AL354714.3-201ENST00000447284 493 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC239367.2-201ENST00000447309 705 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 RPS15AP17-201ENST00000470598 390 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 OR2AO1P-201ENST00000476497 403 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 RPL30P11-201ENST00000495304 339 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC096751.1-202ENST00000502691 1067 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 PRELID3BP7-201ENST00000503606 469 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 BNIP3P41-201ENST00000503774 571 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC018797.3-201ENST00000513388 1241 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AL161713.1-201ENST00000555538 145 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AGGF1P8-201ENST00000562979 1000 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 MIR4637-201ENST00000582405 84 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC104785.1-201ENST00000603220 588 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AP000403.1-201ENST00000603349 851 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC105254.2-201ENST00000603636 436 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC093765.1-201ENST00000603758 881 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC092794.1-201ENST00000612734 582 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC019206.1-201ENST00000621938 425 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC099494.2-201ENST00000623371 978 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC068137.3-201ENST00000639191 341 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 AC073869.6-201ENST00000640656 341 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 GDI2P1-201ENST00000429312 1336 ntBASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PTCHD4Q6ZW05 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.44□□□□□ -1.7
PTCHD4Q6ZW05 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCHD4Q6ZW05 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCHD4Q6ZW05 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCHD4Q6ZW05 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCHD4Q6ZW05 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
PTCHD4Q6ZW05 Y_RNA.97-201ENST00000363094 102 ntBASIC4.44□□□□□ -1.7
PTCHD4Q6ZW05 MIR649-201ENST00000384843 97 ntBASIC4.44□□□□□ -1.7
PTCHD4Q6ZW05 OR6C69P-201ENST00000394268 893 ntBASIC4.44□□□□□ -1.7
PTCHD4Q6ZW05 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.44□□□□□ -1.7
PTCHD4Q6ZW05 RN7SKP56-201ENST00000410513 331 ntBASIC4.44□□□□□ -1.7
PTCHD4Q6ZW05 RAD23BP2-201ENST00000416003 1207 ntBASIC4.44□□□□□ -1.7
PTCHD4Q6ZW05 RPL21P32-201ENST00000419877 477 ntBASIC4.44□□□□□ -1.7
PTCHD4Q6ZW05 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.44□□□□□ -1.7
PTCHD4Q6ZW05 AC010975.2-201ENST00000427781 588 ntBASIC4.44□□□□□ -1.7
PTCHD4Q6ZW05 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.44□□□□□ -1.7
PTCHD4Q6ZW05 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms