Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.67□□□□□ -1.82
TPM4P67936 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.67□□□□□ -1.82
TPM4P67936 AL035458.1-201ENST00000433096 585 ntBASIC3.67□□□□□ -1.82
TPM4P67936 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.67□□□□□ -1.82
TPM4P67936 HMGB1P26-201ENST00000452520 628 ntBASIC3.67□□□□□ -1.82
TPM4P67936 AC073387.1-201ENST00000453261 709 ntBASIC3.67□□□□□ -1.82
TPM4P67936 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TPM4P67936 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.67□□□□□ -1.82
TPM4P67936 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.67□□□□□ -1.82
TPM4P67936 HMGB3P15-201ENST00000507326 574 ntBASIC3.67□□□□□ -1.82
TPM4P67936 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.67□□□□□ -1.82
TPM4P67936 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
TPM4P67936 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.67□□□□□ -1.82
TPM4P67936 CENPUP2-201ENST00000555897 1186 ntBASIC3.67□□□□□ -1.82
TPM4P67936 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.67□□□□□ -1.82
TPM4P67936 PCNAP1-202ENST00000595299 752 ntBASIC3.67□□□□□ -1.82
TPM4P67936 AC015802.5-201ENST00000607478 399 ntBASIC3.67□□□□□ -1.82
TPM4P67936 RNA5SP196-201ENST00000625967 102 ntBASIC3.67□□□□□ -1.82
TPM4P67936 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.67□□□□□ -1.82
TPM4P67936 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.67□□□□□ -1.82
TPM4P67936 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
TPM4P67936 MAPK10-362ENST00000641864 4484 ntBASIC3.66□□□□□ -1.82
TPM4P67936 U3.6-201ENST00000363622 211 ntBASIC3.66□□□□□ -1.82
TPM4P67936 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM4P67936 SNORA48.8-201ENST00000391324 134 ntBASIC3.66□□□□□ -1.82
TPM4P67936 XKRYP4-201ENST00000414395 483 ntBASIC3.66□□□□□ -1.82
TPM4P67936 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.66□□□□□ -1.82
TPM4P67936 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.66□□□□□ -1.82
TPM4P67936 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.66□□□□□ -1.82
TPM4P67936 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.66□□□□□ -1.82
TPM4P67936 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM4P67936 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TPM4P67936 RPL29P29-201ENST00000448725 423 ntBASIC3.66□□□□□ -1.82
TPM4P67936 XKRYP5-201ENST00000449659 483 ntBASIC3.66□□□□□ -1.82
TPM4P67936 AC092754.2-201ENST00000463506 460 ntBASIC3.66□□□□□ -1.82
TPM4P67936 RPL31P13-201ENST00000484151 370 ntBASIC3.66□□□□□ -1.82
TPM4P67936 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM4P67936 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.66□□□□□ -1.82
TPM4P67936 AC108120.2-201ENST00000512973 294 ntBASIC3.66□□□□□ -1.82
TPM4P67936 AC067904.2-201ENST00000517322 1283 ntBASIC3.66□□□□□ -1.82
TPM4P67936 AC103843.2-201ENST00000530523 682 ntBASIC3.66□□□□□ -1.82
TPM4P67936 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.66□□□□□ -1.82
TPM4P67936 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.66□□□□□ -1.82
TPM4P67936 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.66□□□□□ -1.82
TPM4P67936 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.66□□□□□ -1.82
TPM4P67936 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM4P67936 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.66□□□□□ -1.82
TPM4P67936 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.66□□□□□ -1.82
TPM4P67936 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM4P67936 AC090425.2-201ENST00000608818 501 ntBASIC3.66□□□□□ -1.82
TPM4P67936 MIR6758-201ENST00000620653 63 ntBASIC3.66□□□□□ -1.82
TPM4P67936 PLCE1P1-201ENST00000622094 305 ntBASIC3.66□□□□□ -1.82
TPM4P67936 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM4P67936 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TPM4P67936 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TPM4P67936 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
TPM4P67936 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM4P67936 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.66□□□□□ -1.82
TPM4P67936 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.65□□□□□ -1.82
TPM4P67936 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.65□□□□□ -1.82
TPM4P67936 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.65□□□□□ -1.82
TPM4P67936 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TPM4P67936 XPOTP1-201ENST00000443317 2398 ntBASIC3.65□□□□□ -1.83
TPM4P67936 AC021755.1-201ENST00000559747 1447 ntBASIC3.65□□□□□ -1.83
TPM4P67936 RNU6-185P-201ENST00000384421 107 ntBASIC3.65□□□□□ -1.83
TPM4P67936 U8.11-201ENST00000384699 133 ntBASIC3.65□□□□□ -1.83
TPM4P67936 U8.12-201ENST00000384701 133 ntBASIC3.65□□□□□ -1.83
TPM4P67936 RN7SKP123-201ENST00000410732 291 ntBASIC3.65□□□□□ -1.83
TPM4P67936 RN7SKP58-201ENST00000411010 305 ntBASIC3.65□□□□□ -1.83
TPM4P67936 BMS1P22-201ENST00000414726 313 ntBASIC3.65□□□□□ -1.83
TPM4P67936 AC245054.2-201ENST00000415639 319 ntBASIC3.65□□□□□ -1.83
TPM4P67936 MTND2P16-201ENST00000419987 799 ntBASIC3.65□□□□□ -1.83
TPM4P67936 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
TPM4P67936 CYCSP4-201ENST00000429682 331 ntBASIC3.65□□□□□ -1.83
TPM4P67936 MTCO1P43-201ENST00000431831 488 ntBASIC3.65□□□□□ -1.83
TPM4P67936 HMGB1P45-201ENST00000435986 653 ntBASIC3.65□□□□□ -1.83
TPM4P67936 UQCRHP3-201ENST00000451503 251 ntBASIC3.65□□□□□ -1.83
TPM4P67936 C1DP3-201ENST00000455013 423 ntBASIC3.65□□□□□ -1.83
TPM4P67936 U8.18-201ENST00000459285 133 ntBASIC3.65□□□□□ -1.83
TPM4P67936 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.65□□□□□ -1.83
TPM4P67936 AC108860.1-201ENST00000484521 383 ntBASIC3.65□□□□□ -1.83
TPM4P67936 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TPM4P67936 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.65□□□□□ -1.83
TPM4P67936 OR8L1P-201ENST00000534005 955 ntBASIC3.65□□□□□ -1.83
TPM4P67936 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.65□□□□□ -1.83
TPM4P67936 MIR548Y-201ENST00000582739 110 ntBASIC3.65□□□□□ -1.83
TPM4P67936 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.65□□□□□ -1.83
TPM4P67936 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.65□□□□□ -1.83
TPM4P67936 AL392112.1-201ENST00000605115 829 ntBASIC3.65□□□□□ -1.83
TPM4P67936 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
TPM4P67936 AC092184.1-201ENST00000625042 715 ntBASIC3.65□□□□□ -1.83
TPM4P67936 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
TPM4P67936 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
TPM4P67936 AL079305.1-201ENST00000623159 3008 ntBASIC3.65□□□□□ -1.83
TPM4P67936 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.64□□□□□ -1.83
TPM4P67936 RNA5SP391-201ENST00000363456 119 ntBASIC3.64□□□□□ -1.83
TPM4P67936 MIR607-201ENST00000385241 96 ntBASIC3.64□□□□□ -1.83
TPM4P67936 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.64□□□□□ -1.83
TPM4P67936 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.64□□□□□ -1.83
TPM4P67936 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms