Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.26□□□□□ -1.73
CLDN2P57739 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN2P57739 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN2P57739 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN2P57739 AC112220.3-201ENST00000605502 502 ntBASIC4.26□□□□□ -1.73
CLDN2P57739 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN2P57739 AC245297.2-201ENST00000610119 565 ntBASIC4.26□□□□□ -1.73
CLDN2P57739 AC007546.1-201ENST00000619452 559 ntBASIC4.26□□□□□ -1.73
CLDN2P57739 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN2P57739 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN2P57739 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.26□□□□□ -1.73
CLDN2P57739 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CLDN2P57739 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN2P57739 AC117529.2-201ENST00000512159 2068 ntBASIC4.26□□□□□ -1.73
CLDN2P57739 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN2P57739 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN2P57739 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CLDN2P57739 SAGE4P-201ENST00000442271 3381 ntBASIC4.26□□□□□ -1.73
CLDN2P57739 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN2P57739 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.26□□□□□ -1.73
CLDN2P57739 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN2P57739 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.26□□□□□ -1.73
CLDN2P57739 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN2P57739 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CLDN2P57739 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.25□□□□□ -1.73
CLDN2P57739 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN2P57739 MAPK10-303ENST00000641324 3959 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CLDN2P57739 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
CLDN2P57739 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN2P57739 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN2P57739 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
CLDN2P57739 RNA5SP307-201ENST00000362863 116 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN2P57739 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN2P57739 SNORD116-2-201ENST00000384274 95 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 RNU6-1122P-201ENST00000384449 107 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 SNORD116-6-201ENST00000384711 96 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.25□□□□□ -1.73
CLDN2P57739 RNU2-28P-201ENST00000410457 189 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AL133384.1-201ENST00000412744 351 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.25□□□□□ -1.73
CLDN2P57739 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.25□□□□□ -1.73
CLDN2P57739 AL593851.1-201ENST00000426171 157 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN2P57739 TXNL1P1-201ENST00000429528 554 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 BTF3P10-201ENST00000433415 495 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AL132765.1-201ENST00000434165 553 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 RPS25P9-201ENST00000435591 252 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 UBE2D3P1-201ENST00000436669 444 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AC122718.1-201ENST00000439448 744 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.25□□□□□ -1.73
CLDN2P57739 MTND2P22-201ENST00000444325 1033 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN2P57739 PTMAP3-201ENST00000447474 330 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN2P57739 SLC31A1P1-201ENST00000451221 567 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 HMGB3P21-201ENST00000452483 547 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.25□□□□□ -1.73
CLDN2P57739 MTCO3P2-201ENST00000457365 171 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 FAM133DP-201ENST00000464802 691 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 BET1P1-201ENST00000482276 359 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 RPS27AP13-201ENST00000498403 237 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN2P57739 MTATP6P22-201ENST00000507369 598 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AC105313.1-201ENST00000509121 353 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN2P57739 KCTD9P2-201ENST00000512203 1013 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 Y_RNA.688-201ENST00000516565 95 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.25□□□□□ -1.73
CLDN2P57739 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN2P57739 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN2P57739 AC091515.1-201ENST00000548110 679 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.25□□□□□ -1.73
CLDN2P57739 AL352979.3-201ENST00000553515 247 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.25□□□□□ -1.73
CLDN2P57739 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.25□□□□□ -1.73
CLDN2P57739 AC012321.1-201ENST00000561622 1588 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AC124068.1-201ENST00000563131 678 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AC106785.1-201ENST00000565935 262 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 MIR4504-201ENST00000577413 92 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 MIR1254-2-201ENST00000579553 63 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 SNORD39.3-201ENST00000584451 71 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AC107982.3-201ENST00000584957 985 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN2P57739 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN2P57739 AC006539.2-201ENST00000601729 572 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AL109653.1-201ENST00000603091 248 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AC010201.1-201ENST00000605051 540 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AC006270.3-201ENST00000605967 1036 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AP001521.1-201ENST00000609150 300 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.25□□□□□ -1.73
CLDN2P57739 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN2P57739 BNIP3P41-202ENST00000616656 861 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AL136981.2-201ENST00000617319 734 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.25□□□□□ -1.73
CLDN2P57739 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN2P57739 AC068722.2-201ENST00000618734 544 ntBASIC4.25□□□□□ -1.73
CLDN2P57739 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.25□□□□□ -1.73
CLDN2P57739 MIR3974-201ENST00000637126 96 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms