Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 SDCBPP2-201ENST00000424643 885 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.51□□□□□ -1.85
PKNOX1P55347 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.51□□□□□ -1.85
PKNOX1P55347 TXNP1-201ENST00000441872 371 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 RN7SL330P-201ENST00000469709 307 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 AC078857.1-201ENST00000469870 667 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.51□□□□□ -1.85
PKNOX1P55347 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.51□□□□□ -1.85
PKNOX1P55347 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.51□□□□□ -1.85
PKNOX1P55347 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PKNOX1P55347 AC027338.1-201ENST00000514840 825 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.51□□□□□ -1.85
PKNOX1P55347 AP006245.1-201ENST00000522549 120 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 MTND5P21-201ENST00000531961 522 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.51□□□□□ -1.85
PKNOX1P55347 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.51□□□□□ -1.85
PKNOX1P55347 CENPUP2-201ENST00000555897 1186 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.51□□□□□ -1.85
PKNOX1P55347 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.51□□□□□ -1.85
PKNOX1P55347 TGIF1P1-201ENST00000558095 802 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.51□□□□□ -1.85
PKNOX1P55347 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.51□□□□□ -1.85
PKNOX1P55347 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.51□□□□□ -1.85
PKNOX1P55347 AC090312.2-201ENST00000582687 378 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.51□□□□□ -1.85
PKNOX1P55347 AC007687.1-201ENST00000602704 304 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 AC006077.1-201ENST00000604746 343 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 AC245100.7-201ENST00000609678 442 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 AC096586.1-201ENST00000610267 561 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 MIR8084-201ENST00000614105 89 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 VN1R9P-201ENST00000614184 867 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 MIR6875-201ENST00000617506 72 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 AC018926.3-201ENST00000618841 406 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 AC006065.5-201ENST00000623427 349 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PKNOX1P55347 AC000367.1-201ENST00000452711 1766 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 AC068647.1-201ENST00000489539 2265 ntBASIC3.5□□□□□ -1.85
PKNOX1P55347 SEPT7P7-201ENST00000420492 1301 ntBASIC3.5□□□□□ -1.85
PKNOX1P55347 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PKNOX1P55347 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PKNOX1P55347 MFSD8-236ENST00000641509 4050 ntBASIC3.5□□□□□ -1.85
PKNOX1P55347 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
PKNOX1P55347 AC068538.1-201ENST00000376856 336 ntBASIC3.5□□□□□ -1.85
PKNOX1P55347 RNU6-356P-201ENST00000384140 107 ntBASIC3.5□□□□□ -1.85
PKNOX1P55347 RNU6-628P-201ENST00000410675 107 ntBASIC3.5□□□□□ -1.85
PKNOX1P55347 AC245054.1-201ENST00000420944 258 ntBASIC3.5□□□□□ -1.85
PKNOX1P55347 AL139247.1-201ENST00000422768 325 ntBASIC3.5□□□□□ -1.85
PKNOX1P55347 RPS27AP12-201ENST00000429552 465 ntBASIC3.5□□□□□ -1.85
PKNOX1P55347 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.5□□□□□ -1.85
PKNOX1P55347 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.5□□□□□ -1.85
PKNOX1P55347 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.5□□□□□ -1.85
PKNOX1P55347 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.5□□□□□ -1.85
PKNOX1P55347 RPL23AP14-201ENST00000468281 468 ntBASIC3.5□□□□□ -1.85
PKNOX1P55347 AC084357.1-201ENST00000473404 255 ntBASIC3.5□□□□□ -1.85
PKNOX1P55347 VN1R105P-201ENST00000486595 910 ntBASIC3.5□□□□□ -1.85
PKNOX1P55347 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.5□□□□□ -1.85
PKNOX1P55347 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PKNOX1P55347 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.5□□□□□ -1.85
PKNOX1P55347 AL442163.2-201ENST00000553912 710 ntBASIC3.5□□□□□ -1.85
PKNOX1P55347 ATP5F1P7-201ENST00000567330 760 ntBASIC3.5□□□□□ -1.85
PKNOX1P55347 MIR4286-201ENST00000580651 93 ntBASIC3.5□□□□□ -1.85
PKNOX1P55347 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PKNOX1P55347 BNIP3P38-201ENST00000601117 544 ntBASIC3.5□□□□□ -1.85
PKNOX1P55347 AC005776.1-201ENST00000603164 290 ntBASIC3.5□□□□□ -1.85
PKNOX1P55347 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.5□□□□□ -1.85
PKNOX1P55347 AL590396.2-201ENST00000636511 1041 ntBASIC3.5□□□□□ -1.85
PKNOX1P55347 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PKNOX1P55347 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PKNOX1P55347 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PKNOX1P55347 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PKNOX1P55347 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.5□□□□□ -1.85
PKNOX1P55347 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.5□□□□□ -1.85
PKNOX1P55347 MTND4P8-201ENST00000514997 1362 ntBASIC3.5□□□□□ -1.85
PKNOX1P55347 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PKNOX1P55347 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.49□□□□□ -1.85
PKNOX1P55347 FAM91A3P-201ENST00000456826 2544 ntBASIC3.49□□□□□ -1.85
PKNOX1P55347 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PKNOX1P55347 NSRP1P1-201ENST00000444067 1693 ntBASIC3.49□□□□□ -1.85
PKNOX1P55347 AC058791.1-201ENST00000608412 3198 ntBASIC3.49□□□□□ -1.85
PKNOX1P55347 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PKNOX1P55347 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PKNOX1P55347 AC011978.2-201ENST00000569835 2054 ntBASIC3.49□□□□□ -1.85
PKNOX1P55347 MIR16-2-201ENST00000362117 81 ntBASIC3.49□□□□□ -1.85
PKNOX1P55347 RNU6-1339P-201ENST00000363574 91 ntBASIC3.49□□□□□ -1.85
PKNOX1P55347 OR52E6-202ENST00000379946 954 ntBASIC3.49□□□□□ -1.85
PKNOX1P55347 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.49□□□□□ -1.85
PKNOX1P55347 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PKNOX1P55347 RNU6-55P-201ENST00000411092 107 ntBASIC3.49□□□□□ -1.85
PKNOX1P55347 RNU6-954P-201ENST00000411355 107 ntBASIC3.49□□□□□ -1.85
PKNOX1P55347 COX6CP17-201ENST00000421389 185 ntBASIC3.49□□□□□ -1.85
PKNOX1P55347 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.49□□□□□ -1.85
PKNOX1P55347 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.49□□□□□ -1.85
PKNOX1P55347 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.49□□□□□ -1.85
PKNOX1P55347 MTCO1P43-201ENST00000431831 488 ntBASIC3.49□□□□□ -1.85
PKNOX1P55347 UBE2V1P5-201ENST00000440070 405 ntBASIC3.49□□□□□ -1.85
PKNOX1P55347 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.49□□□□□ -1.85
PKNOX1P55347 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.49□□□□□ -1.85
PKNOX1P55347 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.49□□□□□ -1.85
PKNOX1P55347 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.49□□□□□ -1.85
PKNOX1P55347 RPL7P55-201ENST00000450522 746 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms