Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC067852.7-201ENST00000623270 535 ntBASIC3.49□□□□□ -1.85
LIM2P55344 AL109659.3-201ENST00000624985 950 ntBASIC3.49□□□□□ -1.85
LIM2P55344 AP000553.6-201ENST00000641242 118 ntBASIC3.49□□□□□ -1.85
LIM2P55344 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LIM2P55344 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LIM2P55344 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LIM2P55344 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LIM2P55344 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.48□□□□□ -1.85
LIM2P55344 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.48□□□□□ -1.85
LIM2P55344 AC073073.2-201ENST00000609827 2578 ntBASIC3.48□□□□□ -1.85
LIM2P55344 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
LIM2P55344 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
LIM2P55344 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LIM2P55344 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.48□□□□□ -1.85
LIM2P55344 RNA5SP391-201ENST00000363456 119 ntBASIC3.48□□□□□ -1.85
LIM2P55344 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
LIM2P55344 U6.112-201ENST00000384129 70 ntBASIC3.48□□□□□ -1.85
LIM2P55344 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.48□□□□□ -1.85
LIM2P55344 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.48□□□□□ -1.85
LIM2P55344 PRELID3BP11-201ENST00000414230 479 ntBASIC3.48□□□□□ -1.85
LIM2P55344 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.48□□□□□ -1.85
LIM2P55344 RPL36AP36-201ENST00000418616 301 ntBASIC3.48□□□□□ -1.85
LIM2P55344 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LIM2P55344 AC008065.1-201ENST00000428525 348 ntBASIC3.48□□□□□ -1.85
LIM2P55344 FO393414.1-201ENST00000428697 1184 ntBASIC3.48□□□□□ -1.85
LIM2P55344 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.48□□□□□ -1.85
LIM2P55344 NDUFB1P1-201ENST00000435191 180 ntBASIC3.48□□□□□ -1.85
LIM2P55344 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.48□□□□□ -1.85
LIM2P55344 AL645931.1-201ENST00000439737 410 ntBASIC3.48□□□□□ -1.85
LIM2P55344 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.48□□□□□ -1.85
LIM2P55344 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.48□□□□□ -1.85
LIM2P55344 NDUFS5P3-201ENST00000450668 321 ntBASIC3.48□□□□□ -1.85
LIM2P55344 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LIM2P55344 AL672167.3-201ENST00000465951 960 ntBASIC3.48□□□□□ -1.85
LIM2P55344 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.48□□□□□ -1.85
LIM2P55344 AC090071.1-201ENST00000507713 644 ntBASIC3.48□□□□□ -1.85
LIM2P55344 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.48□□□□□ -1.85
LIM2P55344 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.48□□□□□ -1.85
LIM2P55344 RNU6-488P-201ENST00000515918 99 ntBASIC3.48□□□□□ -1.85
LIM2P55344 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.48□□□□□ -1.85
LIM2P55344 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.48□□□□□ -1.85
LIM2P55344 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.48□□□□□ -1.85
LIM2P55344 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.48□□□□□ -1.85
LIM2P55344 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.48□□□□□ -1.85
LIM2P55344 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.48□□□□□ -1.85
LIM2P55344 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.48□□□□□ -1.85
LIM2P55344 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.48□□□□□ -1.85
LIM2P55344 AC017100.2-201ENST00000584628 355 ntBASIC3.48□□□□□ -1.85
LIM2P55344 VN1R87P-201ENST00000596706 487 ntBASIC3.48□□□□□ -1.85
LIM2P55344 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.48□□□□□ -1.85
LIM2P55344 AC244505.7-201ENST00000599675 272 ntBASIC3.48□□□□□ -1.85
LIM2P55344 AP002802.2-201ENST00000605877 235 ntBASIC3.48□□□□□ -1.85
LIM2P55344 AL391497.1-201ENST00000608671 547 ntBASIC3.48□□□□□ -1.85
LIM2P55344 AP004247.3-201ENST00000608682 624 ntBASIC3.48□□□□□ -1.85
LIM2P55344 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.48□□□□□ -1.85
LIM2P55344 AL359535.1-201ENST00000612100 1087 ntBASIC3.48□□□□□ -1.85
LIM2P55344 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LIM2P55344 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
LIM2P55344 AC106858.1-201ENST00000637497 429 ntBASIC3.48□□□□□ -1.85
LIM2P55344 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
LIM2P55344 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
LIM2P55344 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.48□□□□□ -1.85
LIM2P55344 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.48□□□□□ -1.85
LIM2P55344 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.48□□□□□ -1.85
LIM2P55344 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.47□□□□□ -1.85
LIM2P55344 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.47□□□□□ -1.85
LIM2P55344 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.47□□□□□ -1.85
LIM2P55344 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
LIM2P55344 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.47□□□□□ -1.85
LIM2P55344 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LIM2P55344 AL136964.1-201ENST00000622038 2990 ntBASIC3.47□□□□□ -1.85
LIM2P55344 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LIM2P55344 MIR423-201ENST00000362201 94 ntBASIC3.47□□□□□ -1.85
LIM2P55344 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.47□□□□□ -1.85
LIM2P55344 SNORD3H-201ENST00000384486 214 ntBASIC3.47□□□□□ -1.85
LIM2P55344 AC007066.1-201ENST00000392902 381 ntBASIC3.47□□□□□ -1.85
LIM2P55344 RNU6-272P-201ENST00000411028 104 ntBASIC3.47□□□□□ -1.85
LIM2P55344 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.47□□□□□ -1.85
LIM2P55344 NUP35P2-201ENST00000416748 943 ntBASIC3.47□□□□□ -1.85
LIM2P55344 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.47□□□□□ -1.85
LIM2P55344 AC002075.2-201ENST00000425207 252 ntBASIC3.47□□□□□ -1.85
LIM2P55344 RPS26P56-201ENST00000444468 240 ntBASIC3.47□□□□□ -1.85
LIM2P55344 AL359073.1-201ENST00000448036 403 ntBASIC3.47□□□□□ -1.85
LIM2P55344 AP000893.1-201ENST00000474462 794 ntBASIC3.47□□□□□ -1.85
LIM2P55344 RPS27P23-201ENST00000487608 251 ntBASIC3.47□□□□□ -1.85
LIM2P55344 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LIM2P55344 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LIM2P55344 AC093801.2-201ENST00000503966 1050 ntBASIC3.47□□□□□ -1.85
LIM2P55344 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LIM2P55344 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LIM2P55344 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LIM2P55344 AC119751.1-201ENST00000513357 765 ntBASIC3.47□□□□□ -1.85
LIM2P55344 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LIM2P55344 HIGD1AP6-201ENST00000521833 279 ntBASIC3.47□□□□□ -1.85
LIM2P55344 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.47□□□□□ -1.85
LIM2P55344 AC008489.1-201ENST00000524271 483 ntBASIC3.47□□□□□ -1.85
LIM2P55344 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.47□□□□□ -1.85
LIM2P55344 AP003066.2-201ENST00000529375 555 ntBASIC3.47□□□□□ -1.85
LIM2P55344 TRAV15-201ENST00000556680 249 ntBASIC3.47□□□□□ -1.85
LIM2P55344 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms