Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CACNA2D1P54289 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CACNA2D1P54289 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 AP000357.1-201ENST00000409926 1165 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 RPL21P108-201ENST00000413857 481 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 TCEA1P4-201ENST00000415066 844 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 AL589765.3-201ENST00000446084 462 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 AL591363.1-201ENST00000450091 483 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 AC093392.2-201ENST00000450682 337 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 AL935212.3-201ENST00000450729 284 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 DNAJC19P8-201ENST00000452887 259 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 ISCUP1-201ENST00000454451 448 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CACNA2D1P54289 RN7SL817P-201ENST00000480777 288 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CACNA2D1P54289 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 OR51K1P-201ENST00000510214 950 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 RPS3AP4-201ENST00000555161 764 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 RPL21P7-201ENST00000557463 483 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 AC092325.1-201ENST00000566449 554 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CACNA2D1P54289 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 MIR4666A-201ENST00000580160 79 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 AC069061.3-201ENST00000582254 823 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 AC091135.1-201ENST00000585943 307 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 RPL26P30-202ENST00000602923 645 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 AC068276.1-201ENST00000605793 379 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 AC019193.2-201ENST00000610012 634 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 U6.107-201ENST00000637108 79 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 AC099063.3-201ENST00000642066 185 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CACNA2D1P54289 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CACNA2D1P54289 CASC19-284ENST00000642142 1868 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CACNA2D1P54289 DHX9P1-201ENST00000436565 3076 ntBASIC4.83□□□□□ -1.64
CACNA2D1P54289 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CACNA2D1P54289 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
CACNA2D1P54289 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CACNA2D1P54289 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CACNA2D1P54289 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CACNA2D1P54289 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.82□□□□□ -1.64
CACNA2D1P54289 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CACNA2D1P54289 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CACNA2D1P54289 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CACNA2D1P54289 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CACNA2D1P54289 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.82□□□□□ -1.64
CACNA2D1P54289 Y_RNA.18-201ENST00000362461 102 ntBASIC4.82□□□□□ -1.64
CACNA2D1P54289 RNY4P24-201ENST00000362735 96 ntBASIC4.82□□□□□ -1.64
CACNA2D1P54289 RNU1-83P-201ENST00000363426 164 ntBASIC4.82□□□□□ -1.64
CACNA2D1P54289 RNA5SP447-201ENST00000363749 119 ntBASIC4.82□□□□□ -1.64
CACNA2D1P54289 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.82□□□□□ -1.64
CACNA2D1P54289 MIR195-201ENST00000385194 87 ntBASIC4.82□□□□□ -1.64
CACNA2D1P54289 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CACNA2D1P54289 RNA5SP372-201ENST00000390836 115 ntBASIC4.82□□□□□ -1.64
CACNA2D1P54289 HDGFP1-201ENST00000405943 252 ntBASIC4.82□□□□□ -1.64
CACNA2D1P54289 ELOCP19-201ENST00000411919 318 ntBASIC4.82□□□□□ -1.64
CACNA2D1P54289 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.82□□□□□ -1.64
CACNA2D1P54289 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.82□□□□□ -1.64
CACNA2D1P54289 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.82□□□□□ -1.64
CACNA2D1P54289 IPMKP1-201ENST00000425988 855 ntBASIC4.82□□□□□ -1.64
CACNA2D1P54289 AP001324.1-201ENST00000428553 399 ntBASIC4.82□□□□□ -1.64
CACNA2D1P54289 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.82□□□□□ -1.64
CACNA2D1P54289 MTCO1P54-201ENST00000430139 712 ntBASIC4.82□□□□□ -1.64
CACNA2D1P54289 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.82□□□□□ -1.64
CACNA2D1P54289 AC093155.1-201ENST00000440164 826 ntBASIC4.82□□□□□ -1.64
CACNA2D1P54289 AC104651.2-201ENST00000447549 528 ntBASIC4.82□□□□□ -1.64
CACNA2D1P54289 RPL5P24-201ENST00000463742 885 ntBASIC4.82□□□□□ -1.64
CACNA2D1P54289 RPL21P126-201ENST00000470049 478 ntBASIC4.82□□□□□ -1.64
CACNA2D1P54289 RN7SL860P-201ENST00000473738 223 ntBASIC4.82□□□□□ -1.64
CACNA2D1P54289 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.82□□□□□ -1.64
CACNA2D1P54289 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CACNA2D1P54289 DYNLL1P6-201ENST00000503440 264 ntBASIC4.82□□□□□ -1.64
CACNA2D1P54289 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.82□□□□□ -1.64
CACNA2D1P54289 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.82□□□□□ -1.64
CACNA2D1P54289 ARL2BPP4-201ENST00000506854 471 ntBASIC4.82□□□□□ -1.64
CACNA2D1P54289 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.82□□□□□ -1.64
CACNA2D1P54289 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CACNA2D1P54289 AC087808.1-201ENST00000520501 361 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms