Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIMK2P53671 FAM91A3P-201ENST00000456826 2544 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIMK2P53671 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LIMK2P53671 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
LIMK2P53671 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIMK2P53671 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIMK2P53671 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIMK2P53671 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LIMK2P53671 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LIMK2P53671 RNU1-18P-201ENST00000363062 164 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 PTMAP2-201ENST00000397627 327 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 HLFP1-201ENST00000402375 499 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 VN1R51P-201ENST00000411675 945 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LIMK2P53671 RPL37P1-201ENST00000432310 284 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 RPS6P12-201ENST00000432491 726 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 AC105402.2-201ENST00000438503 358 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.91□□□□□ -1.78
LIMK2P53671 RPS26P30-201ENST00000443431 335 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 RANP8-201ENST00000444720 713 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 HMGB1P48-201ENST00000446155 598 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 MTND1P33-201ENST00000446251 917 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 AL929288.2-201ENST00000446368 407 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 RN7SL93P-201ENST00000463035 293 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.91□□□□□ -1.78
LIMK2P53671 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.91□□□□□ -1.78
LIMK2P53671 MTATP6P22-201ENST00000507369 598 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 AC008885.2-201ENST00000509506 930 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LIMK2P53671 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.91□□□□□ -1.78
LIMK2P53671 AC005798.1-201ENST00000513715 387 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.91□□□□□ -1.78
LIMK2P53671 PRELID3BP4-201ENST00000515476 571 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 NARSP2-201ENST00000518524 679 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.91□□□□□ -1.78
LIMK2P53671 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.91□□□□□ -1.78
LIMK2P53671 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.91□□□□□ -1.78
LIMK2P53671 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.91□□□□□ -1.78
LIMK2P53671 OR7E13P-201ENST00000526052 910 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 YPEL5P3-201ENST00000547227 352 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.91□□□□□ -1.78
LIMK2P53671 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.91□□□□□ -1.78
LIMK2P53671 AC090877.1-201ENST00000561418 344 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LIMK2P53671 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.91□□□□□ -1.78
LIMK2P53671 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.91□□□□□ -1.78
LIMK2P53671 AL592436.1-201ENST00000605135 558 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 AC112220.2-201ENST00000605513 533 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.91□□□□□ -1.78
LIMK2P53671 AC048344.4-201ENST00000619744 527 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 AC084824.4-201ENST00000620106 731 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LIMK2P53671 AL109659.3-201ENST00000624985 950 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.91□□□□□ -1.78
LIMK2P53671 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIMK2P53671 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.91□□□□□ -1.78
LIMK2P53671 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
LIMK2P53671 AL031985.3-201ENST00000565390 2449 ntBASIC3.91□□□□□ -1.78
LIMK2P53671 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
LIMK2P53671 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.9□□□□□ -1.78
LIMK2P53671 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
LIMK2P53671 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.9□□□□□ -1.78
LIMK2P53671 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LIMK2P53671 AC025125.1-201ENST00000624743 1922 ntBASIC3.9□□□□□ -1.78
LIMK2P53671 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.9□□□□□ -1.79
LIMK2P53671 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.9□□□□□ -1.79
LIMK2P53671 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
LIMK2P53671 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LIMK2P53671 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LIMK2P53671 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.9□□□□□ -1.79
LIMK2P53671 RNA5SP391-201ENST00000363456 119 ntBASIC3.9□□□□□ -1.79
LIMK2P53671 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.9□□□□□ -1.79
LIMK2P53671 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.9□□□□□ -1.79
LIMK2P53671 U6.112-201ENST00000384129 70 ntBASIC3.9□□□□□ -1.79
LIMK2P53671 UBE2V1P9-201ENST00000414760 368 ntBASIC3.9□□□□□ -1.79
LIMK2P53671 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LIMK2P53671 AC246680.2-201ENST00000422106 389 ntBASIC3.9□□□□□ -1.79
LIMK2P53671 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.9□□□□□ -1.79
LIMK2P53671 RPL21P110-201ENST00000433345 446 ntBASIC3.9□□□□□ -1.79
LIMK2P53671 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.9□□□□□ -1.79
LIMK2P53671 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.9□□□□□ -1.79
LIMK2P53671 OR51B8P-201ENST00000449892 769 ntBASIC3.9□□□□□ -1.79
LIMK2P53671 DUXAP8-207ENST00000456786 622 ntBASIC3.9□□□□□ -1.79
LIMK2P53671 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.9□□□□□ -1.79
LIMK2P53671 AC104164.3-201ENST00000467363 1258 ntBASIC3.9□□□□□ -1.79
LIMK2P53671 GAPDHP36-201ENST00000480688 918 ntBASIC3.9□□□□□ -1.79
LIMK2P53671 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.9□□□□□ -1.79
LIMK2P53671 AC098862.1-201ENST00000504991 413 ntBASIC3.9□□□□□ -1.79
LIMK2P53671 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.9□□□□□ -1.79
LIMK2P53671 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LIMK2P53671 Y_RNA.717-201ENST00000517106 92 ntBASIC3.9□□□□□ -1.79
LIMK2P53671 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.9□□□□□ -1.79
LIMK2P53671 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.9□□□□□ -1.79
LIMK2P53671 AC135001.1-201ENST00000544546 283 ntBASIC3.9□□□□□ -1.79
LIMK2P53671 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
LIMK2P53671 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.9□□□□□ -1.79
LIMK2P53671 MTATP6P24-201ENST00000576835 677 ntBASIC3.9□□□□□ -1.79
LIMK2P53671 AP000919.1-202ENST00000581139 1264 ntBASIC3.9□□□□□ -1.79
LIMK2P53671 MIR4444-1-201ENST00000581696 74 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms