Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RNU6-500P-201ENST00000362349 107 ntBASIC4.74□□□□□ -1.65
COPB1P53618 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COPB1P53618 RNU6-1300P-201ENST00000391046 108 ntBASIC4.74□□□□□ -1.65
COPB1P53618 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.74□□□□□ -1.65
COPB1P53618 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.74□□□□□ -1.65
COPB1P53618 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.74□□□□□ -1.65
COPB1P53618 AL050321.1-201ENST00000432363 400 ntBASIC4.74□□□□□ -1.65
COPB1P53618 AL359265.2-201ENST00000434367 631 ntBASIC4.74□□□□□ -1.65
COPB1P53618 MUPP-201ENST00000438111 566 ntBASIC4.74□□□□□ -1.65
COPB1P53618 CBX1P4-201ENST00000439415 457 ntBASIC4.74□□□□□ -1.65
COPB1P53618 TPTE2P6-202ENST00000445572 1007 ntBASIC4.74□□□□□ -1.65
COPB1P53618 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.74□□□□□ -1.65
COPB1P53618 DHFRP3-201ENST00000455595 559 ntBASIC4.74□□□□□ -1.65
COPB1P53618 RPL5P30-201ENST00000465511 891 ntBASIC4.74□□□□□ -1.65
COPB1P53618 RPL23AP71-201ENST00000470966 469 ntBASIC4.74□□□□□ -1.65
COPB1P53618 RN7SL812P-201ENST00000493791 279 ntBASIC4.74□□□□□ -1.65
COPB1P53618 AC104164.2-201ENST00000496953 495 ntBASIC4.74□□□□□ -1.65
COPB1P53618 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.74□□□□□ -1.65
COPB1P53618 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.74□□□□□ -1.65
COPB1P53618 AC048346.1-201ENST00000510247 144 ntBASIC4.74□□□□□ -1.65
COPB1P53618 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.74□□□□□ -1.65
COPB1P53618 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.74□□□□□ -1.65
COPB1P53618 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.74□□□□□ -1.65
COPB1P53618 RNU6-678P-201ENST00000516832 109 ntBASIC4.74□□□□□ -1.65
COPB1P53618 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.74□□□□□ -1.65
COPB1P53618 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.74□□□□□ -1.65
COPB1P53618 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.74□□□□□ -1.65
COPB1P53618 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COPB1P53618 OR5M7P-201ENST00000526140 972 ntBASIC4.74□□□□□ -1.65
COPB1P53618 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COPB1P53618 HIGD1AP10-201ENST00000527837 282 ntBASIC4.74□□□□□ -1.65
COPB1P53618 AP006289.1-201ENST00000538089 277 ntBASIC4.74□□□□□ -1.65
COPB1P53618 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
COPB1P53618 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.74□□□□□ -1.65
COPB1P53618 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.74□□□□□ -1.65
COPB1P53618 GTF2IP8-201ENST00000560687 584 ntBASIC4.74□□□□□ -1.65
COPB1P53618 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.74□□□□□ -1.65
COPB1P53618 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.74□□□□□ -1.65
COPB1P53618 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.74□□□□□ -1.65
COPB1P53618 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.74□□□□□ -1.65
COPB1P53618 AC103591.3-201ENST00000608684 209 ntBASIC4.74□□□□□ -1.65
COPB1P53618 AL136981.2-201ENST00000617319 734 ntBASIC4.74□□□□□ -1.65
COPB1P53618 AC068792.1-201ENST00000621354 417 ntBASIC4.74□□□□□ -1.65
COPB1P53618 AP003072.4-201ENST00000624580 310 ntBASIC4.74□□□□□ -1.65
COPB1P53618 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.74□□□□□ -1.65
COPB1P53618 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COPB1P53618 AL592182.3-201ENST00000642132 3304 ntBASIC4.74□□□□□ -1.65
COPB1P53618 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
COPB1P53618 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COPB1P53618 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
COPB1P53618 MAPK10-304ENST00000641341 3984 ntBASIC4.73□□□□□ -1.65
COPB1P53618 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
COPB1P53618 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
COPB1P53618 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
COPB1P53618 AC119744.1-201ENST00000454746 1715 ntBASIC4.73□□□□□ -1.65
COPB1P53618 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
COPB1P53618 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COPB1P53618 RNA5SP388-201ENST00000362584 119 ntBASIC4.73□□□□□ -1.65
COPB1P53618 RNU5D-1-201ENST00000363299 116 ntBASIC4.73□□□□□ -1.65
COPB1P53618 RNU4-75P-201ENST00000364621 146 ntBASIC4.73□□□□□ -1.65
COPB1P53618 RPS24P12-201ENST00000402084 394 ntBASIC4.73□□□□□ -1.65
COPB1P53618 AL161631.1-201ENST00000417933 486 ntBASIC4.73□□□□□ -1.65
COPB1P53618 UQCRBP1-201ENST00000421129 336 ntBASIC4.73□□□□□ -1.65
COPB1P53618 RBMY1KP-201ENST00000423480 476 ntBASIC4.73□□□□□ -1.65
COPB1P53618 AC073069.1-201ENST00000428657 441 ntBASIC4.73□□□□□ -1.65
COPB1P53618 AC068287.1-201ENST00000430283 295 ntBASIC4.73□□□□□ -1.65
COPB1P53618 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.73□□□□□ -1.65
COPB1P53618 AL590103.1-201ENST00000434488 307 ntBASIC4.73□□□□□ -1.65
COPB1P53618 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.73□□□□□ -1.65
COPB1P53618 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.73□□□□□ -1.65
COPB1P53618 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.73□□□□□ -1.65
COPB1P53618 MTND1P16-201ENST00000465177 898 ntBASIC4.73□□□□□ -1.65
COPB1P53618 RPL23AP12-201ENST00000467573 473 ntBASIC4.73□□□□□ -1.65
COPB1P53618 RPL7P1-201ENST00000468161 747 ntBASIC4.73□□□□□ -1.65
COPB1P53618 RPL7P9-201ENST00000468715 747 ntBASIC4.73□□□□□ -1.65
COPB1P53618 RN7SL459P-201ENST00000481078 302 ntBASIC4.73□□□□□ -1.65
COPB1P53618 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.73□□□□□ -1.65
COPB1P53618 AC109471.1-201ENST00000511631 612 ntBASIC4.73□□□□□ -1.65
COPB1P53618 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.73□□□□□ -1.65
COPB1P53618 MYL12AP1-201ENST00000518490 515 ntBASIC4.73□□□□□ -1.65
COPB1P53618 IGKV2-36-201ENST00000519999 223 ntBASIC4.73□□□□□ -1.65
COPB1P53618 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.73□□□□□ -1.65
COPB1P53618 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.73□□□□□ -1.65
COPB1P53618 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
COPB1P53618 AC107918.3-201ENST00000533272 382 ntBASIC4.73□□□□□ -1.65
COPB1P53618 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.73□□□□□ -1.65
COPB1P53618 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.73□□□□□ -1.65
COPB1P53618 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.73□□□□□ -1.65
COPB1P53618 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.73□□□□□ -1.65
COPB1P53618 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.73□□□□□ -1.65
COPB1P53618 AC069061.3-201ENST00000582254 823 ntBASIC4.73□□□□□ -1.65
COPB1P53618 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.73□□□□□ -1.65
COPB1P53618 AC008638.3-201ENST00000603341 463 ntBASIC4.73□□□□□ -1.65
COPB1P53618 AL354984.3-201ENST00000604803 325 ntBASIC4.73□□□□□ -1.65
COPB1P53618 AC112220.3-201ENST00000605502 502 ntBASIC4.73□□□□□ -1.65
COPB1P53618 MIR6780A-201ENST00000615089 68 ntBASIC4.73□□□□□ -1.65
COPB1P53618 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.73□□□□□ -1.65
COPB1P53618 AC092184.1-201ENST00000625042 715 ntBASIC4.73□□□□□ -1.65
COPB1P53618 PCMTD1P7-201ENST00000634506 357 ntBASIC4.73□□□□□ -1.65
COPB1P53618 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms