Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 LARP7P3-201ENST00000579888 337 ntBASIC3.84□□□□□ -1.79
ACLYP53396 AL451007.1-201ENST00000595491 289 ntBASIC3.84□□□□□ -1.79
ACLYP53396 HMGB1P50-201ENST00000605814 607 ntBASIC3.84□□□□□ -1.79
ACLYP53396 AP003392.5-201ENST00000607857 415 ntBASIC3.84□□□□□ -1.79
ACLYP53396 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.84□□□□□ -1.79
ACLYP53396 AC016911.1-201ENST00000613297 452 ntBASIC3.84□□□□□ -1.79
ACLYP53396 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.84□□□□□ -1.79
ACLYP53396 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.84□□□□□ -1.79
ACLYP53396 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ACLYP53396 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
ACLYP53396 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.8
ACLYP53396 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.83□□□□□ -1.8
ACLYP53396 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
ACLYP53396 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ACLYP53396 AL590290.1-201ENST00000405336 380 ntBASIC3.83□□□□□ -1.8
ACLYP53396 AL589655.1-201ENST00000405398 482 ntBASIC3.83□□□□□ -1.8
ACLYP53396 MIR1289-1-201ENST00000408836 144 ntBASIC3.83□□□□□ -1.8
ACLYP53396 AC010385.1-201ENST00000412374 256 ntBASIC3.83□□□□□ -1.8
ACLYP53396 AC004022.2-201ENST00000413824 193 ntBASIC3.83□□□□□ -1.8
ACLYP53396 HMGB3P22-202ENST00000451823 572 ntBASIC3.83□□□□□ -1.8
ACLYP53396 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.83□□□□□ -1.8
ACLYP53396 RPL27AP5-201ENST00000469428 449 ntBASIC3.83□□□□□ -1.8
ACLYP53396 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.83□□□□□ -1.8
ACLYP53396 MTCO1P31-201ENST00000506355 492 ntBASIC3.83□□□□□ -1.8
ACLYP53396 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ACLYP53396 AC109458.1-201ENST00000508858 316 ntBASIC3.83□□□□□ -1.8
ACLYP53396 OR5H4P-201ENST00000510851 923 ntBASIC3.83□□□□□ -1.8
ACLYP53396 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.83□□□□□ -1.8
ACLYP53396 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.83□□□□□ -1.8
ACLYP53396 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.83□□□□□ -1.8
ACLYP53396 Vault.1-201ENST00000516474 102 ntBASIC3.83□□□□□ -1.8
ACLYP53396 MIR2114-201ENST00000516645 80 ntBASIC3.83□□□□□ -1.8
ACLYP53396 IGKV2-36-201ENST00000519999 223 ntBASIC3.83□□□□□ -1.8
ACLYP53396 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.83□□□□□ -1.8
ACLYP53396 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.83□□□□□ -1.8
ACLYP53396 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.83□□□□□ -1.8
ACLYP53396 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.83□□□□□ -1.8
ACLYP53396 PCNAP1-202ENST00000595299 752 ntBASIC3.83□□□□□ -1.8
ACLYP53396 AL139286.1-201ENST00000604465 483 ntBASIC3.83□□□□□ -1.8
ACLYP53396 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.83□□□□□ -1.8
ACLYP53396 U6.48-201ENST00000618523 106 ntBASIC3.83□□□□□ -1.8
ACLYP53396 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.83□□□□□ -1.8
ACLYP53396 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ACLYP53396 AL136964.1-201ENST00000622038 2990 ntBASIC3.83□□□□□ -1.8
ACLYP53396 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ACLYP53396 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.83□□□□□ -1.8
ACLYP53396 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
ACLYP53396 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.83□□□□□ -1.8
ACLYP53396 AC058791.1-201ENST00000608412 3198 ntBASIC3.82□□□□□ -1.8
ACLYP53396 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
ACLYP53396 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
ACLYP53396 MTND4P31-201ENST00000425607 1343 ntBASIC3.82□□□□□ -1.8
ACLYP53396 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
ACLYP53396 RNU1-89P-201ENST00000384592 164 ntBASIC3.82□□□□□ -1.8
ACLYP53396 AL357075.1-201ENST00000404107 726 ntBASIC3.82□□□□□ -1.8
ACLYP53396 U3.39-201ENST00000408569 239 ntBASIC3.82□□□□□ -1.8
ACLYP53396 RPS12P23-201ENST00000419579 400 ntBASIC3.82□□□□□ -1.8
ACLYP53396 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.82□□□□□ -1.8
ACLYP53396 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.82□□□□□ -1.8
ACLYP53396 MTND2P21-201ENST00000436242 1042 ntBASIC3.82□□□□□ -1.8
ACLYP53396 AL645939.1-201ENST00000453429 797 ntBASIC3.82□□□□□ -1.8
ACLYP53396 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.82□□□□□ -1.8
ACLYP53396 RNU6-775P-201ENST00000459318 96 ntBASIC3.82□□□□□ -1.8
ACLYP53396 RN7SL594P-201ENST00000470590 287 ntBASIC3.82□□□□□ -1.8
ACLYP53396 AC011825.1-201ENST00000484967 388 ntBASIC3.82□□□□□ -1.8
ACLYP53396 AC110794.1-201ENST00000505816 425 ntBASIC3.82□□□□□ -1.8
ACLYP53396 MTATP6P22-201ENST00000507369 598 ntBASIC3.82□□□□□ -1.8
ACLYP53396 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ACLYP53396 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.82□□□□□ -1.8
ACLYP53396 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.82□□□□□ -1.8
ACLYP53396 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.82□□□□□ -1.8
ACLYP53396 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.82□□□□□ -1.8
ACLYP53396 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.82□□□□□ -1.8
ACLYP53396 AC092851.1-201ENST00000535964 478 ntBASIC3.82□□□□□ -1.8
ACLYP53396 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.82□□□□□ -1.8
ACLYP53396 AL121594.4-201ENST00000556211 1196 ntBASIC3.82□□□□□ -1.8
ACLYP53396 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.82□□□□□ -1.8
ACLYP53396 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.82□□□□□ -1.8
ACLYP53396 EIF1P6-201ENST00000600054 334 ntBASIC3.82□□□□□ -1.8
ACLYP53396 BRDTP1-201ENST00000605735 677 ntBASIC3.82□□□□□ -1.8
ACLYP53396 CR589904.2-201ENST00000612533 440 ntBASIC3.82□□□□□ -1.8
ACLYP53396 AC006386.2-201ENST00000624491 75 ntBASIC3.82□□□□□ -1.8
ACLYP53396 AC012005.1-201ENST00000624575 75 ntBASIC3.82□□□□□ -1.8
ACLYP53396 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ACLYP53396 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.82□□□□□ -1.8
ACLYP53396 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.82□□□□□ -1.8
ACLYP53396 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ACLYP53396 MFSD8-233ENST00000641482 4860 ntBASIC3.81□□□□□ -1.8
ACLYP53396 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
ACLYP53396 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ACLYP53396 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ACLYP53396 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ACLYP53396 RNA5SP322-201ENST00000363617 119 ntBASIC3.81□□□□□ -1.8
ACLYP53396 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.81□□□□□ -1.8
ACLYP53396 ATP5HP2-201ENST00000433885 485 ntBASIC3.81□□□□□ -1.8
ACLYP53396 S100A11P1-201ENST00000477525 312 ntBASIC3.81□□□□□ -1.8
ACLYP53396 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.81□□□□□ -1.8
ACLYP53396 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ACLYP53396 AC021678.1-201ENST00000505195 936 ntBASIC3.81□□□□□ -1.8
ACLYP53396 RNA5SP341-201ENST00000516261 117 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms