Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AP003399.1-201ENST00000637534 361 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NKX2-1P43699 AC097504.1-201ENST00000515103 2415 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NKX2-1P43699 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.66□□□□□ -1.82
NKX2-1P43699 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NKX2-1P43699 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.66□□□□□ -1.82
NKX2-1P43699 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.66□□□□□ -1.82
NKX2-1P43699 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
NKX2-1P43699 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
NKX2-1P43699 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
NKX2-1P43699 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
NKX2-1P43699 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.65□□□□□ -1.82
NKX2-1P43699 C4BPAP1-201ENST00000415474 1893 ntBASIC3.65□□□□□ -1.82
NKX2-1P43699 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
NKX2-1P43699 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NKX2-1P43699 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NKX2-1P43699 SNRPEP3-201ENST00000338402 276 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NKX2-1P43699 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NKX2-1P43699 RNU6-730P-201ENST00000383954 104 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 Y_RNA.408-201ENST00000383987 102 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 RNU1-106P-201ENST00000384382 164 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 RNU6-1122P-201ENST00000384449 107 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 MIR124-3-201ENST00000384866 87 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NKX2-1P43699 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.65□□□□□ -1.83
NKX2-1P43699 RPL23AP48-201ENST00000406913 488 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 AL450338.1-201ENST00000407987 512 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 SNORA74C-2-201ENST00000411179 201 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 AC098592.1-201ENST00000419352 333 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.65□□□□□ -1.83
NKX2-1P43699 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.65□□□□□ -1.83
NKX2-1P43699 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NKX2-1P43699 AC005517.2-201ENST00000424673 553 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.65□□□□□ -1.83
NKX2-1P43699 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NKX2-1P43699 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.65□□□□□ -1.83
NKX2-1P43699 MTND4P6-201ENST00000438297 472 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 AL445567.1-201ENST00000439121 144 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.65□□□□□ -1.83
NKX2-1P43699 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.65□□□□□ -1.83
NKX2-1P43699 AL451050.1-201ENST00000450126 415 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 FGF7P3-201ENST00000454645 303 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.65□□□□□ -1.83
NKX2-1P43699 MTND1P16-201ENST00000465177 898 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.83
NKX2-1P43699 AC022034.3-201ENST00000471393 478 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 AC104763.1-201ENST00000475274 360 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 RPSAP50-201ENST00000481955 852 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 IGLV2-34-201ENST00000490007 283 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 OR5H5P-201ENST00000503164 928 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 PRELID3BP7-201ENST00000503606 469 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NKX2-1P43699 OR5BM1P-201ENST00000512021 366 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.65□□□□□ -1.83
NKX2-1P43699 OR4R3P-201ENST00000525084 838 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.65□□□□□ -1.83
NKX2-1P43699 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.65□□□□□ -1.83
NKX2-1P43699 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NKX2-1P43699 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.65□□□□□ -1.83
NKX2-1P43699 AC090888.1-201ENST00000561335 1141 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.65□□□□□ -1.83
NKX2-1P43699 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.65□□□□□ -1.83
NKX2-1P43699 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.65□□□□□ -1.83
NKX2-1P43699 RN7SL652P-201ENST00000577769 300 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.65□□□□□ -1.83
NKX2-1P43699 RN7SL753P-201ENST00000581238 290 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.65□□□□□ -1.83
NKX2-1P43699 AC090616.2-202ENST00000584248 222 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.65□□□□□ -1.83
NKX2-1P43699 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.65□□□□□ -1.83
NKX2-1P43699 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.65□□□□□ -1.83
NKX2-1P43699 VN1R90P-201ENST00000595717 726 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 Z99497.2-201ENST00000603634 310 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 AL031281.1-201ENST00000604049 488 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 Z98200.1-201ENST00000607298 470 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 AC020634.1-201ENST00000608701 549 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.65□□□□□ -1.83
NKX2-1P43699 VIS1.1-201ENST00000610517 203 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NKX2-1P43699 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.65□□□□□ -1.83
NKX2-1P43699 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.65□□□□□ -1.83
NKX2-1P43699 OR8B1P-202ENST00000641132 1178 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
NKX2-1P43699 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.65□□□□□ -1.83
NKX2-1P43699 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.65□□□□□ -1.83
NKX2-1P43699 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NKX2-1P43699 DCAF13P1-201ENST00000495256 1330 ntBASIC3.65□□□□□ -1.83
NKX2-1P43699 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.65□□□□□ -1.83
NKX2-1P43699 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NKX2-1P43699 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.65□□□□□ -1.83
NKX2-1P43699 AL133412.1-201ENST00000380194 2992 ntBASIC3.64□□□□□ -1.83
NKX2-1P43699 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
NKX2-1P43699 AC108467.2-201ENST00000617640 1597 ntBASIC3.64□□□□□ -1.83
NKX2-1P43699 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.64□□□□□ -1.83
NKX2-1P43699 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.64□□□□□ -1.83
NKX2-1P43699 AL079343.1-201ENST00000572358 1771 ntBASIC3.64□□□□□ -1.83
NKX2-1P43699 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms