Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.55□□□□□ -1.52
CCNFP41002 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.55□□□□□ -1.52
CCNFP41002 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCNFP41002 AL136380.1-201ENST00000447970 162 ntBASIC5.55□□□□□ -1.52
CCNFP41002 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.55□□□□□ -1.52
CCNFP41002 RPS20P20-201ENST00000460498 340 ntBASIC5.55□□□□□ -1.52
CCNFP41002 RPL36AP51-201ENST00000487216 318 ntBASIC5.55□□□□□ -1.52
CCNFP41002 AC093267.1-201ENST00000489176 961 ntBASIC5.55□□□□□ -1.52
CCNFP41002 AC005726.1-201ENST00000494679 427 ntBASIC5.55□□□□□ -1.52
CCNFP41002 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.55□□□□□ -1.52
CCNFP41002 AC010587.1-201ENST00000505809 469 ntBASIC5.55□□□□□ -1.52
CCNFP41002 RNU6-1153P-201ENST00000516760 105 ntBASIC5.55□□□□□ -1.52
CCNFP41002 CYCSP22-201ENST00000517555 339 ntBASIC5.55□□□□□ -1.52
CCNFP41002 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.55□□□□□ -1.52
CCNFP41002 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.55□□□□□ -1.52
CCNFP41002 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.55□□□□□ -1.52
CCNFP41002 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.55□□□□□ -1.52
CCNFP41002 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
CCNFP41002 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.55□□□□□ -1.52
CCNFP41002 AC005261.5-201ENST00000596280 355 ntBASIC5.55□□□□□ -1.52
CCNFP41002 AC108738.1-201ENST00000603703 237 ntBASIC5.55□□□□□ -1.52
CCNFP41002 Z84480.1-201ENST00000605131 311 ntBASIC5.55□□□□□ -1.52
CCNFP41002 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.55□□□□□ -1.52
CCNFP41002 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.55□□□□□ -1.52
CCNFP41002 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCNFP41002 YWHAEP7-203ENST00000622054 312 ntBASIC5.55□□□□□ -1.52
CCNFP41002 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.55□□□□□ -1.52
CCNFP41002 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCNFP41002 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCNFP41002 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.55□□□□□ -1.52
CCNFP41002 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCNFP41002 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.55□□□□□ -1.52
CCNFP41002 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.55□□□□□ -1.52
CCNFP41002 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCNFP41002 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCNFP41002 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCNFP41002 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCNFP41002 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.55□□□□□ -1.52
CCNFP41002 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCNFP41002 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCNFP41002 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCNFP41002 AC107027.3-201ENST00000565095 3473 ntBASIC5.54□□□□□ -1.52
CCNFP41002 HSPA8P18-201ENST00000439846 1928 ntBASIC5.54□□□□□ -1.52
CCNFP41002 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
CCNFP41002 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CCNFP41002 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCNFP41002 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CCNFP41002 AC006026.1-201ENST00000444025 1803 ntBASIC5.54□□□□□ -1.52
CCNFP41002 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCNFP41002 RNU6-28P-201ENST00000362378 107 ntBASIC5.54□□□□□ -1.52
CCNFP41002 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCNFP41002 RNU6-1293P-201ENST00000384077 107 ntBASIC5.54□□□□□ -1.52
CCNFP41002 RNA5SP284-201ENST00000384547 118 ntBASIC5.54□□□□□ -1.52
CCNFP41002 SNORD56.6-201ENST00000384569 71 ntBASIC5.54□□□□□ -1.52
CCNFP41002 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CCNFP41002 AL356421.1-201ENST00000403255 413 ntBASIC5.54□□□□□ -1.52
CCNFP41002 BTBD10P2-201ENST00000404779 676 ntBASIC5.54□□□□□ -1.52
CCNFP41002 MTATP6P18-201ENST00000417994 673 ntBASIC5.54□□□□□ -1.52
CCNFP41002 AC104837.2-201ENST00000427236 424 ntBASIC5.54□□□□□ -1.52
CCNFP41002 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.54□□□□□ -1.52
CCNFP41002 RPL7AP49-201ENST00000429522 581 ntBASIC5.54□□□□□ -1.52
CCNFP41002 AL591438.1-201ENST00000433508 581 ntBASIC5.54□□□□□ -1.52
CCNFP41002 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.54□□□□□ -1.52
CCNFP41002 CALM1P1-201ENST00000442082 433 ntBASIC5.54□□□□□ -1.52
CCNFP41002 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.54□□□□□ -1.52
CCNFP41002 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.54□□□□□ -1.52
CCNFP41002 BX842559.2-201ENST00000451418 605 ntBASIC5.54□□□□□ -1.52
CCNFP41002 APOOP2-201ENST00000461561 539 ntBASIC5.54□□□□□ -1.52
CCNFP41002 PLGLA-201ENST00000465668 449 ntBASIC5.54□□□□□ -1.52
CCNFP41002 AC087879.1-201ENST00000474343 374 ntBASIC5.54□□□□□ -1.52
CCNFP41002 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.54□□□□□ -1.52
CCNFP41002 AC098976.1-201ENST00000513014 541 ntBASIC5.54□□□□□ -1.52
CCNFP41002 RNU6-615P-201ENST00000516065 106 ntBASIC5.54□□□□□ -1.52
CCNFP41002 OR8L1P-201ENST00000534005 955 ntBASIC5.54□□□□□ -1.52
CCNFP41002 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.54□□□□□ -1.52
CCNFP41002 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.54□□□□□ -1.52
CCNFP41002 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.54□□□□□ -1.52
CCNFP41002 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.54□□□□□ -1.52
CCNFP41002 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.54□□□□□ -1.52
CCNFP41002 AC078795.3-201ENST00000602913 472 ntBASIC5.54□□□□□ -1.52
CCNFP41002 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.54□□□□□ -1.52
CCNFP41002 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.54□□□□□ -1.52
CCNFP41002 RNU6-156P-201ENST00000621869 107 ntBASIC5.54□□□□□ -1.52
CCNFP41002 AP001005.3-201ENST00000622049 129 ntBASIC5.54□□□□□ -1.52
CCNFP41002 AC024614.3-201ENST00000637860 256 ntBASIC5.54□□□□□ -1.52
CCNFP41002 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.54□□□□□ -1.52
CCNFP41002 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.54□□□□□ -1.52
CCNFP41002 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCNFP41002 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCNFP41002 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCNFP41002 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCNFP41002 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.54□□□□□ -1.52
CCNFP41002 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCNFP41002 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCNFP41002 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCNFP41002 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCNFP41002 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCNFP41002 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.53□□□□□ -1.52
CCNFP41002 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.53□□□□□ -1.52
CCNFP41002 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms