Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AL513302.2-201ENST00000562313 1842 ntBASIC3.79□□□□□ -1.8
SCN4AP35499 U3.12-201ENST00000364498 214 ntBASIC3.79□□□□□ -1.8
SCN4AP35499 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SCN4AP35499 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SCN4AP35499 RN7SKP220-201ENST00000410611 288 ntBASIC3.79□□□□□ -1.8
SCN4AP35499 SETP10-201ENST00000424368 814 ntBASIC3.79□□□□□ -1.8
SCN4AP35499 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN4AP35499 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN4AP35499 HMGB1P3-201ENST00000502802 616 ntBASIC3.79□□□□□ -1.8
SCN4AP35499 AC018797.3-201ENST00000513388 1241 ntBASIC3.79□□□□□ -1.8
SCN4AP35499 RN7SKP116-201ENST00000516902 319 ntBASIC3.79□□□□□ -1.8
SCN4AP35499 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCN4AP35499 AC091544.4-201ENST00000555268 342 ntBASIC3.79□□□□□ -1.8
SCN4AP35499 AC074140.1-201ENST00000621617 208 ntBASIC3.79□□□□□ -1.8
SCN4AP35499 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCN4AP35499 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SCN4AP35499 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SCN4AP35499 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.78□□□□□ -1.8
SCN4AP35499 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
SCN4AP35499 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SCN4AP35499 BMS1P22-201ENST00000414726 313 ntBASIC3.78□□□□□ -1.8
SCN4AP35499 AC107015.1-201ENST00000466902 747 ntBASIC3.78□□□□□ -1.8
SCN4AP35499 RPL23AP73-201ENST00000492507 471 ntBASIC3.78□□□□□ -1.8
SCN4AP35499 FCF1P3-201ENST00000496394 590 ntBASIC3.78□□□□□ -1.8
SCN4AP35499 SETP12-201ENST00000514068 805 ntBASIC3.78□□□□□ -1.8
SCN4AP35499 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN4AP35499 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.78□□□□□ -1.8
SCN4AP35499 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN4AP35499 AC015849.6-201ENST00000605454 474 ntBASIC3.78□□□□□ -1.8
SCN4AP35499 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SCN4AP35499 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SCN4AP35499 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
SCN4AP35499 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SCN4AP35499 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SCN4AP35499 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SCN4AP35499 RSL24D1P4-201ENST00000400938 484 ntBASIC3.77□□□□□ -1.81
SCN4AP35499 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.77□□□□□ -1.81
SCN4AP35499 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.77□□□□□ -1.81
SCN4AP35499 AC011242.1-201ENST00000433596 1158 ntBASIC3.77□□□□□ -1.81
SCN4AP35499 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.77□□□□□ -1.81
SCN4AP35499 TXNP1-201ENST00000441872 371 ntBASIC3.77□□□□□ -1.81
SCN4AP35499 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN4AP35499 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.77□□□□□ -1.81
SCN4AP35499 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.77□□□□□ -1.81
SCN4AP35499 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.77□□□□□ -1.81
SCN4AP35499 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SCN4AP35499 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.77□□□□□ -1.81
SCN4AP35499 AC096644.4-201ENST00000563417 2912 ntBASIC3.77□□□□□ -1.81
SCN4AP35499 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SCN4AP35499 RPL31P12-201ENST00000422587 358 ntBASIC3.77□□□□□ -1.81
SCN4AP35499 VN1R96P-201ENST00000446052 858 ntBASIC3.77□□□□□ -1.81
SCN4AP35499 HMGN2P7-201ENST00000456186 273 ntBASIC3.77□□□□□ -1.81
SCN4AP35499 AC128713.1-201ENST00000471495 306 ntBASIC3.77□□□□□ -1.81
SCN4AP35499 NIPA2P2-201ENST00000496376 1083 ntBASIC3.77□□□□□ -1.81
SCN4AP35499 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN4AP35499 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.77□□□□□ -1.81
SCN4AP35499 PDCL2P2-201ENST00000533651 189 ntBASIC3.77□□□□□ -1.81
SCN4AP35499 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN4AP35499 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN4AP35499 AC015917.1-201ENST00000579654 510 ntBASIC3.77□□□□□ -1.81
SCN4AP35499 AC096586.2-201ENST00000610260 441 ntBASIC3.77□□□□□ -1.81
SCN4AP35499 AL592295.2-201ENST00000612578 206 ntBASIC3.77□□□□□ -1.81
SCN4AP35499 DDX18P3-201ENST00000404856 2007 ntBASIC3.77□□□□□ -1.81
SCN4AP35499 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SCN4AP35499 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
SCN4AP35499 AL365361.1-201ENST00000566942 3481 ntBASIC3.76□□□□□ -1.81
SCN4AP35499 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC3.76□□□□□ -1.81
SCN4AP35499 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SCN4AP35499 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.76□□□□□ -1.81
SCN4AP35499 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.76□□□□□ -1.81
SCN4AP35499 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SCN4AP35499 AC073136.2-201ENST00000417282 849 ntBASIC3.76□□□□□ -1.81
SCN4AP35499 AC127526.1-201ENST00000417526 366 ntBASIC3.76□□□□□ -1.81
SCN4AP35499 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.76□□□□□ -1.81
SCN4AP35499 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.76□□□□□ -1.81
SCN4AP35499 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.76□□□□□ -1.81
SCN4AP35499 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.76□□□□□ -1.81
SCN4AP35499 AC135999.1-201ENST00000478962 479 ntBASIC3.76□□□□□ -1.81
SCN4AP35499 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.76□□□□□ -1.81
SCN4AP35499 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.76□□□□□ -1.81
SCN4AP35499 BNIP3P38-201ENST00000601117 544 ntBASIC3.76□□□□□ -1.81
SCN4AP35499 AC007619.2-201ENST00000605743 379 ntBASIC3.76□□□□□ -1.81
SCN4AP35499 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SCN4AP35499 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.76□□□□□ -1.81
SCN4AP35499 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SCN4AP35499 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SCN4AP35499 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.75□□□□□ -1.81
SCN4AP35499 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SCN4AP35499 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.75□□□□□ -1.81
SCN4AP35499 SNORA18.3-201ENST00000384122 132 ntBASIC3.75□□□□□ -1.81
SCN4AP35499 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.75□□□□□ -1.81
SCN4AP35499 AP000936.3-201ENST00000438127 255 ntBASIC3.75□□□□□ -1.81
SCN4AP35499 MTND6P18-201ENST00000439477 513 ntBASIC3.75□□□□□ -1.81
SCN4AP35499 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.75□□□□□ -1.81
SCN4AP35499 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.75□□□□□ -1.81
SCN4AP35499 NECAP1P2-201ENST00000455668 727 ntBASIC3.75□□□□□ -1.81
SCN4AP35499 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.75□□□□□ -1.81
SCN4AP35499 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.75□□□□□ -1.81
SCN4AP35499 AC034159.1-201ENST00000513885 583 ntBASIC3.75□□□□□ -1.81
SCN4AP35499 EIF4EP5-201ENST00000528228 640 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms