Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC2.81□□□□□ -1.96
FREM3P0C091 TXNP1-201ENST00000441872 371 ntBASIC2.81□□□□□ -1.96
FREM3P0C091 AC146507.2-201ENST00000460608 476 ntBASIC2.81□□□□□ -1.96
FREM3P0C091 TRBV8-1-201ENST00000481590 279 ntBASIC2.81□□□□□ -1.96
FREM3P0C091 NIPA2P2-201ENST00000496376 1083 ntBASIC2.81□□□□□ -1.96
FREM3P0C091 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.81□□□□□ -1.96
FREM3P0C091 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.81□□□□□ -1.96
FREM3P0C091 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.81□□□□□ -1.96
FREM3P0C091 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC2.81□□□□□ -1.96
FREM3P0C091 CYCSP41-201ENST00000616920 296 ntBASIC2.81□□□□□ -1.96
FREM3P0C091 BMS1P21-201ENST00000634565 365 ntBASIC2.81□□□□□ -1.96
FREM3P0C091 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.81□□□□□ -1.96
FREM3P0C091 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
FREM3P0C091 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
FREM3P0C091 BX005019.1-201ENST00000561881 1810 ntBASIC2.8□□□□□ -1.96
FREM3P0C091 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
FREM3P0C091 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
FREM3P0C091 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.8□□□□□ -1.96
FREM3P0C091 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
FREM3P0C091 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
FREM3P0C091 RNA5SP383-201ENST00000362934 120 ntBASIC2.8□□□□□ -1.96
FREM3P0C091 RNA5SP107-201ENST00000411358 122 ntBASIC2.8□□□□□ -1.96
FREM3P0C091 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.8□□□□□ -1.96
FREM3P0C091 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.8□□□□□ -1.96
FREM3P0C091 MTND6P32-201ENST00000457611 483 ntBASIC2.8□□□□□ -1.96
FREM3P0C091 AP002371.1-201ENST00000463604 433 ntBASIC2.8□□□□□ -1.96
FREM3P0C091 RPL27AP5-201ENST00000469428 449 ntBASIC2.8□□□□□ -1.96
FREM3P0C091 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC2.8□□□□□ -1.96
FREM3P0C091 AC245166.1-201ENST00000521012 253 ntBASIC2.8□□□□□ -1.96
FREM3P0C091 AL121603.1-201ENST00000553815 142 ntBASIC2.8□□□□□ -1.96
FREM3P0C091 AC005242.1-201ENST00000585658 438 ntBASIC2.8□□□□□ -1.96
FREM3P0C091 AC005858.4-201ENST00000623191 700 ntBASIC2.8□□□□□ -1.96
FREM3P0C091 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC2.8□□□□□ -1.96
FREM3P0C091 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
FREM3P0C091 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
FREM3P0C091 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
FREM3P0C091 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
FREM3P0C091 AL592494.2-201ENST00000425455 1548 ntBASIC2.8□□□□□ -1.96
FREM3P0C091 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.8□□□□□ -1.96
FREM3P0C091 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.8□□□□□ -1.96
FREM3P0C091 UBA52P6-201ENST00000399822 382 ntBASIC2.8□□□□□ -1.96
FREM3P0C091 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC2.8□□□□□ -1.96
FREM3P0C091 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.8□□□□□ -1.96
FREM3P0C091 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC2.8□□□□□ -1.96
FREM3P0C091 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.8□□□□□ -1.96
FREM3P0C091 AL139132.1-201ENST00000431587 344 ntBASIC2.8□□□□□ -1.96
FREM3P0C091 AL353597.2-202ENST00000434901 373 ntBASIC2.8□□□□□ -1.96
FREM3P0C091 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.8□□□□□ -1.96
FREM3P0C091 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.8□□□□□ -1.96
FREM3P0C091 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.8□□□□□ -1.96
FREM3P0C091 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.8□□□□□ -1.96
FREM3P0C091 AC073522.1-201ENST00000483312 377 ntBASIC2.8□□□□□ -1.96
FREM3P0C091 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.8□□□□□ -1.96
FREM3P0C091 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC2.8□□□□□ -1.96
FREM3P0C091 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC2.8□□□□□ -1.96
FREM3P0C091 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.8□□□□□ -1.96
FREM3P0C091 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
FREM3P0C091 MIR4644-201ENST00000579929 84 ntBASIC2.8□□□□□ -1.96
FREM3P0C091 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.8□□□□□ -1.96
FREM3P0C091 AC006504.3-201ENST00000586818 523 ntBASIC2.8□□□□□ -1.96
FREM3P0C091 AC011492.1-201ENST00000600023 315 ntBASIC2.8□□□□□ -1.96
FREM3P0C091 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
FREM3P0C091 AL356489.2-201ENST00000566968 3528 ntBASIC2.8□□□□□ -1.96
FREM3P0C091 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
FREM3P0C091 AL049555.1-201ENST00000562834 1933 ntBASIC2.79□□□□□ -1.96
FREM3P0C091 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
FREM3P0C091 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
FREM3P0C091 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
FREM3P0C091 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
FREM3P0C091 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
FREM3P0C091 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.79□□□□□ -1.96
FREM3P0C091 AC008725.1-201ENST00000605123 2263 ntBASIC2.79□□□□□ -1.96
FREM3P0C091 RNU6-984P-201ENST00000363236 109 ntBASIC2.79□□□□□ -1.96
FREM3P0C091 AC093719.1-202ENST00000392735 373 ntBASIC2.79□□□□□ -1.96
FREM3P0C091 AC006960.1-201ENST00000419980 153 ntBASIC2.79□□□□□ -1.96
FREM3P0C091 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.79□□□□□ -1.96
FREM3P0C091 MTCO1P45-201ENST00000431457 267 ntBASIC2.79□□□□□ -1.96
FREM3P0C091 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.79□□□□□ -1.96
FREM3P0C091 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.79□□□□□ -1.96
FREM3P0C091 AC125238.1-201ENST00000448842 249 ntBASIC2.79□□□□□ -1.96
FREM3P0C091 RPS27P29-201ENST00000463110 252 ntBASIC2.79□□□□□ -1.96
FREM3P0C091 AC098799.1-201ENST00000504752 800 ntBASIC2.79□□□□□ -1.96
FREM3P0C091 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.79□□□□□ -1.96
FREM3P0C091 RNU6-1231P-201ENST00000517185 103 ntBASIC2.79□□□□□ -1.96
FREM3P0C091 RN7SKP289-201ENST00000517244 295 ntBASIC2.79□□□□□ -1.96
FREM3P0C091 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.79□□□□□ -1.96
FREM3P0C091 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.79□□□□□ -1.96
FREM3P0C091 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.79□□□□□ -1.96
FREM3P0C091 AL451142.2-201ENST00000429076 2090 ntBASIC2.79□□□□□ -1.96
FREM3P0C091 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
FREM3P0C091 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.79□□□□□ -1.96
FREM3P0C091 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
FREM3P0C091 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
FREM3P0C091 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
FREM3P0C091 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.78□□□□□ -1.96
FREM3P0C091 MIR365B-201ENST00000362317 111 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
FREM3P0C091 MTCO3P31-201ENST00000405526 789 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 AL138885.1-201ENST00000405921 675 ntBASIC2.78□□□□□ -1.96
FREM3P0C091 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms