Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RNA5SP217-201ENST00000515959 91 ntBASIC3.22□□□□□ -1.89
HLA-DQB2P05538 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DQB2P05538 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DQB2P05538 MIR5680-201ENST00000577577 84 ntBASIC3.22□□□□□ -1.89
HLA-DQB2P05538 AP000919.1-202ENST00000581139 1264 ntBASIC3.22□□□□□ -1.89
HLA-DQB2P05538 MIR4512-201ENST00000583257 77 ntBASIC3.22□□□□□ -1.89
HLA-DQB2P05538 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DQB2P05538 AC024220.1-201ENST00000603675 484 ntBASIC3.22□□□□□ -1.89
HLA-DQB2P05538 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DQB2P05538 AC105227.2-201ENST00000615075 605 ntBASIC3.22□□□□□ -1.89
HLA-DQB2P05538 AC123768.4-201ENST00000616244 701 ntBASIC3.22□□□□□ -1.89
HLA-DQB2P05538 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DQB2P05538 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DQB2P05538 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HLA-DQB2P05538 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HLA-DQB2P05538 AC119744.1-201ENST00000454746 1715 ntBASIC3.22□□□□□ -1.89
HLA-DQB2P05538 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
HLA-DQB2P05538 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
HLA-DQB2P05538 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQB2P05538 MTND5P24-201ENST00000438892 1767 ntBASIC3.21□□□□□ -1.9
HLA-DQB2P05538 MIR34B-201ENST00000385076 84 ntBASIC3.21□□□□□ -1.9
HLA-DQB2P05538 MIR320B1-201ENST00000390209 79 ntBASIC3.21□□□□□ -1.9
HLA-DQB2P05538 NPM1P24-201ENST00000428039 894 ntBASIC3.21□□□□□ -1.9
HLA-DQB2P05538 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DQB2P05538 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DQB2P05538 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
HLA-DQB2P05538 ELOCP23-201ENST00000452014 332 ntBASIC3.21□□□□□ -1.9
HLA-DQB2P05538 RPL31P53-201ENST00000457065 348 ntBASIC3.21□□□□□ -1.9
HLA-DQB2P05538 RN7SL863P-201ENST00000462370 296 ntBASIC3.21□□□□□ -1.9
HLA-DQB2P05538 RPL9P32-201ENST00000464118 620 ntBASIC3.21□□□□□ -1.9
HLA-DQB2P05538 AC109925.1-201ENST00000478069 331 ntBASIC3.21□□□□□ -1.9
HLA-DQB2P05538 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DQB2P05538 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DQB2P05538 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DQB2P05538 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DQB2P05538 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DQB2P05538 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DQB2P05538 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DQB2P05538 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DQB2P05538 SRGNP1-201ENST00000603392 451 ntBASIC3.21□□□□□ -1.9
HLA-DQB2P05538 AC007423.1-201ENST00000605009 627 ntBASIC3.21□□□□□ -1.9
HLA-DQB2P05538 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DQB2P05538 RPL23AP61-201ENST00000623642 466 ntBASIC3.21□□□□□ -1.9
HLA-DQB2P05538 AC004777.1-201ENST00000624317 287 ntBASIC3.21□□□□□ -1.9
HLA-DQB2P05538 MIR7153-201ENST00000637758 57 ntBASIC3.21□□□□□ -1.9
HLA-DQB2P05538 SRP72P2-201ENST00000344851 1979 ntBASIC3.21□□□□□ -1.9
HLA-DQB2P05538 ELL2P4-201ENST00000446870 1376 ntBASIC3.21□□□□□ -1.9
HLA-DQB2P05538 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQB2P05538 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
HLA-DQB2P05538 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DQB2P05538 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DQB2P05538 AC004972.1-201ENST00000623934 2209 ntBASIC3.2□□□□□ -1.9
HLA-DQB2P05538 RNA5SP383-201ENST00000362934 120 ntBASIC3.2□□□□□ -1.9
HLA-DQB2P05538 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DQB2P05538 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.2□□□□□ -1.9
HLA-DQB2P05538 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DQB2P05538 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DQB2P05538 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DQB2P05538 HMGB3P8-201ENST00000449709 577 ntBASIC3.2□□□□□ -1.9
HLA-DQB2P05538 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DQB2P05538 AC010468.1-201ENST00000461022 817 ntBASIC3.2□□□□□ -1.9
HLA-DQB2P05538 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
HLA-DQB2P05538 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DQB2P05538 NDUFB4P9-201ENST00000511646 388 ntBASIC3.2□□□□□ -1.9
HLA-DQB2P05538 OR4C2P-201ENST00000530855 1064 ntBASIC3.2□□□□□ -1.9
HLA-DQB2P05538 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.2□□□□□ -1.9
HLA-DQB2P05538 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.2□□□□□ -1.9
HLA-DQB2P05538 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DQB2P05538 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.2□□□□□ -1.9
HLA-DQB2P05538 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.2□□□□□ -1.9
HLA-DQB2P05538 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.2□□□□□ -1.9
HLA-DQB2P05538 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DQB2P05538 PRELID3BP8-201ENST00000604148 295 ntBASIC3.2□□□□□ -1.9
HLA-DQB2P05538 AL096803.3-201ENST00000609032 532 ntBASIC3.2□□□□□ -1.9
HLA-DQB2P05538 AL133370.2-201ENST00000619934 439 ntBASIC3.2□□□□□ -1.9
HLA-DQB2P05538 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DQB2P05538 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.2□□□□□ -1.9
HLA-DQB2P05538 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DQB2P05538 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DQB2P05538 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DQB2P05538 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DQB2P05538 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQB2P05538 OR1S2-201ENST00000302592 978 ntBASIC3.19□□□□□ -1.9
HLA-DQB2P05538 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.19□□□□□ -1.9
HLA-DQB2P05538 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQB2P05538 U3.19-201ENST00000390893 196 ntBASIC3.19□□□□□ -1.9
HLA-DQB2P05538 SNORD65-201ENST00000391079 73 ntBASIC3.19□□□□□ -1.9
HLA-DQB2P05538 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DQB2P05538 AC108734.1-201ENST00000439549 399 ntBASIC3.19□□□□□ -1.9
HLA-DQB2P05538 AL353093.1-201ENST00000441292 436 ntBASIC3.19□□□□□ -1.9
HLA-DQB2P05538 AC245517.2-201ENST00000442890 346 ntBASIC3.19□□□□□ -1.9
HLA-DQB2P05538 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DQB2P05538 AL136097.1-201ENST00000456945 913 ntBASIC3.19□□□□□ -1.9
HLA-DQB2P05538 PRDX3P4-201ENST00000470828 747 ntBASIC3.19□□□□□ -1.9
HLA-DQB2P05538 AC010683.1-201ENST00000473673 378 ntBASIC3.19□□□□□ -1.9
HLA-DQB2P05538 ST13P14-201ENST00000474095 734 ntBASIC3.19□□□□□ -1.9
HLA-DQB2P05538 RPL32P34-201ENST00000486380 400 ntBASIC3.19□□□□□ -1.9
HLA-DQB2P05538 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DQB2P05538 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
HLA-DQB2P05538 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms