Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.08□□□□□ -1.76
VTNP04004 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.08□□□□□ -1.76
VTNP04004 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.08□□□□□ -1.76
VTNP04004 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.08□□□□□ -1.76
VTNP04004 IGKV2-36-201ENST00000519999 223 ntBASIC4.08□□□□□ -1.76
VTNP04004 AC104417.1-201ENST00000523974 751 ntBASIC4.08□□□□□ -1.76
VTNP04004 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.08□□□□□ -1.76
VTNP04004 DEFB109D-201ENST00000529497 240 ntBASIC4.08□□□□□ -1.76
VTNP04004 LRRC6P1-201ENST00000532188 885 ntBASIC4.08□□□□□ -1.76
VTNP04004 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.08□□□□□ -1.76
VTNP04004 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.08□□□□□ -1.76
VTNP04004 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
VTNP04004 MTND1P24-201ENST00000552175 861 ntBASIC4.08□□□□□ -1.76
VTNP04004 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.08□□□□□ -1.76
VTNP04004 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.08□□□□□ -1.76
VTNP04004 AC007823.1-201ENST00000569932 1566 ntBASIC4.08□□□□□ -1.76
VTNP04004 MTND4LP24-201ENST00000572277 291 ntBASIC4.08□□□□□ -1.76
VTNP04004 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.08□□□□□ -1.76
VTNP04004 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.08□□□□□ -1.76
VTNP04004 MRPS35P3-201ENST00000603189 709 ntBASIC4.08□□□□□ -1.76
VTNP04004 AC008638.3-201ENST00000603341 463 ntBASIC4.08□□□□□ -1.76
VTNP04004 AL365400.2-201ENST00000605604 902 ntBASIC4.08□□□□□ -1.76
VTNP04004 U3.45-201ENST00000607547 219 ntBASIC4.08□□□□□ -1.76
VTNP04004 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.08□□□□□ -1.76
VTNP04004 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VTNP04004 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VTNP04004 AL357559.1-201ENST00000622228 274 ntBASIC4.08□□□□□ -1.76
VTNP04004 AP003072.4-201ENST00000624580 310 ntBASIC4.08□□□□□ -1.76
VTNP04004 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
VTNP04004 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
VTNP04004 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
VTNP04004 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.07□□□□□ -1.76
VTNP04004 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
VTNP04004 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VTNP04004 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VTNP04004 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
VTNP04004 AC007685.1-201ENST00000329806 452 ntBASIC4.07□□□□□ -1.76
VTNP04004 AC019155.1-201ENST00000382242 574 ntBASIC4.07□□□□□ -1.76
VTNP04004 Y_RNA.578-201ENST00000390903 88 ntBASIC4.07□□□□□ -1.76
VTNP04004 RNA5SP424-201ENST00000390988 115 ntBASIC4.07□□□□□ -1.76
VTNP04004 AC092745.2-202ENST00000411880 369 ntBASIC4.07□□□□□ -1.76
VTNP04004 BTF3P8-201ENST00000414577 526 ntBASIC4.07□□□□□ -1.76
VTNP04004 LIPT1P1-201ENST00000415870 1186 ntBASIC4.07□□□□□ -1.76
VTNP04004 TAF13P2-201ENST00000416876 286 ntBASIC4.07□□□□□ -1.76
VTNP04004 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.07□□□□□ -1.76
VTNP04004 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VTNP04004 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.07□□□□□ -1.76
VTNP04004 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
VTNP04004 AC068135.1-201ENST00000446164 246 ntBASIC4.07□□□□□ -1.76
VTNP04004 OFD1P3Y-201ENST00000453312 783 ntBASIC4.07□□□□□ -1.76
VTNP04004 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.07□□□□□ -1.76
VTNP04004 AC010683.1-201ENST00000473673 378 ntBASIC4.07□□□□□ -1.76
VTNP04004 TRBV12-2-201ENST00000489763 344 ntBASIC4.07□□□□□ -1.76
VTNP04004 AC005726.1-201ENST00000494679 427 ntBASIC4.07□□□□□ -1.76
VTNP04004 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.07□□□□□ -1.76
VTNP04004 AC008802.1-201ENST00000519121 791 ntBASIC4.07□□□□□ -1.76
VTNP04004 AP001372.4-201ENST00000524889 472 ntBASIC4.07□□□□□ -1.76
VTNP04004 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.07□□□□□ -1.76
VTNP04004 AC069240.1-201ENST00000548774 375 ntBASIC4.07□□□□□ -1.76
VTNP04004 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.07□□□□□ -1.76
VTNP04004 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.07□□□□□ -1.76
VTNP04004 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.07□□□□□ -1.76
VTNP04004 AC006960.3-201ENST00000561845 705 ntBASIC4.07□□□□□ -1.76
VTNP04004 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.07□□□□□ -1.76
VTNP04004 AL139395.1-201ENST00000603662 160 ntBASIC4.07□□□□□ -1.76
VTNP04004 AC012468.1-201ENST00000604888 430 ntBASIC4.07□□□□□ -1.76
VTNP04004 AC112220.2-201ENST00000605513 533 ntBASIC4.07□□□□□ -1.76
VTNP04004 AC084757.4-201ENST00000616350 526 ntBASIC4.07□□□□□ -1.76
VTNP04004 AP000770.2-201ENST00000623694 100 ntBASIC4.07□□□□□ -1.76
VTNP04004 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.07□□□□□ -1.76
VTNP04004 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.07□□□□□ -1.76
VTNP04004 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
VTNP04004 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VTNP04004 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VTNP04004 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.06□□□□□ -1.76
VTNP04004 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VTNP04004 SNORD9-201ENST00000362566 104 ntBASIC4.06□□□□□ -1.76
VTNP04004 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.06□□□□□ -1.76
VTNP04004 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.06□□□□□ -1.76
VTNP04004 AC245052.5-201ENST00000416320 649 ntBASIC4.06□□□□□ -1.76
VTNP04004 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.06□□□□□ -1.76
VTNP04004 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.06□□□□□ -1.76
VTNP04004 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.06□□□□□ -1.76
VTNP04004 AL592437.1-201ENST00000443781 492 ntBASIC4.06□□□□□ -1.76
VTNP04004 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.06□□□□□ -1.76
VTNP04004 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.06□□□□□ -1.76
VTNP04004 DNAJC19P8-201ENST00000452887 259 ntBASIC4.06□□□□□ -1.76
VTNP04004 PRSS3P4-201ENST00000453323 162 ntBASIC4.06□□□□□ -1.76
VTNP04004 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.06□□□□□ -1.76
VTNP04004 RN7SL293P-201ENST00000481765 281 ntBASIC4.06□□□□□ -1.76
VTNP04004 AC113430.1-201ENST00000506872 718 ntBASIC4.06□□□□□ -1.76
VTNP04004 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.06□□□□□ -1.76
VTNP04004 AC008837.1-201ENST00000511513 412 ntBASIC4.06□□□□□ -1.76
VTNP04004 RN7SKP13-201ENST00000515933 244 ntBASIC4.06□□□□□ -1.76
VTNP04004 RNU6-1028P-201ENST00000517164 93 ntBASIC4.06□□□□□ -1.76
VTNP04004 AP001207.2-201ENST00000519490 539 ntBASIC4.06□□□□□ -1.76
VTNP04004 MTND2P32-201ENST00000521584 1038 ntBASIC4.06□□□□□ -1.76
VTNP04004 OR10V3P-201ENST00000525712 725 ntBASIC4.06□□□□□ -1.76
VTNP04004 NDUFS5P6-201ENST00000529136 295 ntBASIC4.06□□□□□ -1.76
VTNP04004 OR5B10P-201ENST00000532869 642 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms