Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC037471.2-201ENST00000564941 598 ntBASIC3.55□□□□□ -1.84
APOEP02649 ELOCP35-201ENST00000604289 336 ntBASIC3.55□□□□□ -1.84
APOEP02649 AC015802.5-201ENST00000607478 399 ntBASIC3.55□□□□□ -1.84
APOEP02649 AC245389.2-201ENST00000616023 576 ntBASIC3.55□□□□□ -1.84
APOEP02649 AC242843.1-201ENST00000618702 573 ntBASIC3.55□□□□□ -1.84
APOEP02649 AC110801.1-201ENST00000623590 212 ntBASIC3.55□□□□□ -1.84
APOEP02649 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
APOEP02649 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.55□□□□□ -1.84
APOEP02649 AC118273.1-201ENST00000525324 3006 ntBASIC3.54□□□□□ -1.84
APOEP02649 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
APOEP02649 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.54□□□□□ -1.84
APOEP02649 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
APOEP02649 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOEP02649 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.54□□□□□ -1.84
APOEP02649 DCAF13P1-201ENST00000495256 1330 ntBASIC3.54□□□□□ -1.84
APOEP02649 SNORA63.1-201ENST00000362493 131 ntBASIC3.54□□□□□ -1.84
APOEP02649 RNU1-33P-201ENST00000364249 162 ntBASIC3.54□□□□□ -1.84
APOEP02649 SNORA48.8-201ENST00000391324 134 ntBASIC3.54□□□□□ -1.84
APOEP02649 HSFY4P-201ENST00000415994 1181 ntBASIC3.54□□□□□ -1.84
APOEP02649 OR1AA1P-201ENST00000419597 916 ntBASIC3.54□□□□□ -1.84
APOEP02649 BX679664.1-201ENST00000434429 253 ntBASIC3.54□□□□□ -1.84
APOEP02649 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.54□□□□□ -1.84
APOEP02649 AC006539.3-201ENST00000454258 129 ntBASIC3.54□□□□□ -1.84
APOEP02649 PTGES3P5-201ENST00000455109 434 ntBASIC3.54□□□□□ -1.84
APOEP02649 RPS4XP2-201ENST00000458402 793 ntBASIC3.54□□□□□ -1.84
APOEP02649 AC034236.1-201ENST00000469891 373 ntBASIC3.54□□□□□ -1.84
APOEP02649 RPL7P49-201ENST00000471402 708 ntBASIC3.54□□□□□ -1.84
APOEP02649 AC087312.1-201ENST00000471411 480 ntBASIC3.54□□□□□ -1.84
APOEP02649 AC021205.2-201ENST00000480069 347 ntBASIC3.54□□□□□ -1.84
APOEP02649 AC073522.1-201ENST00000483312 377 ntBASIC3.54□□□□□ -1.84
APOEP02649 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.54□□□□□ -1.84
APOEP02649 APOOP4-201ENST00000513530 597 ntBASIC3.54□□□□□ -1.84
APOEP02649 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.54□□□□□ -1.84
APOEP02649 IGKV2-26-201ENST00000518305 343 ntBASIC3.54□□□□□ -1.84
APOEP02649 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.54□□□□□ -1.84
APOEP02649 OR4R3P-201ENST00000525084 838 ntBASIC3.54□□□□□ -1.84
APOEP02649 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.54□□□□□ -1.84
APOEP02649 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.54□□□□□ -1.84
APOEP02649 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.54□□□□□ -1.84
APOEP02649 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.54□□□□□ -1.84
APOEP02649 NCAPGP2-201ENST00000557911 754 ntBASIC3.54□□□□□ -1.84
APOEP02649 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.54□□□□□ -1.84
APOEP02649 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.54□□□□□ -1.84
APOEP02649 AC024220.1-201ENST00000603675 484 ntBASIC3.54□□□□□ -1.84
APOEP02649 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.54□□□□□ -1.84
APOEP02649 MIR7975-201ENST00000619350 68 ntBASIC3.54□□□□□ -1.84
APOEP02649 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.54□□□□□ -1.84
APOEP02649 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
APOEP02649 AL592494.2-201ENST00000425455 1548 ntBASIC3.54□□□□□ -1.84
APOEP02649 AL513302.2-201ENST00000562313 1842 ntBASIC3.54□□□□□ -1.84
APOEP02649 AL672296.1-201ENST00000427780 2158 ntBASIC3.53□□□□□ -1.84
APOEP02649 DDX6P1-205ENST00000441966 1436 ntBASIC3.53□□□□□ -1.84
APOEP02649 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
APOEP02649 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
APOEP02649 MIR591-201ENST00000385290 95 ntBASIC3.53□□□□□ -1.84
APOEP02649 Z99755.1-201ENST00000414048 380 ntBASIC3.53□□□□□ -1.84
APOEP02649 MTND4P11-201ENST00000417020 1058 ntBASIC3.53□□□□□ -1.84
APOEP02649 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.53□□□□□ -1.84
APOEP02649 AC097262.1-201ENST00000452559 548 ntBASIC3.53□□□□□ -1.84
APOEP02649 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.53□□□□□ -1.84
APOEP02649 RPL5P13-201ENST00000462840 709 ntBASIC3.53□□□□□ -1.84
APOEP02649 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
APOEP02649 HMGB1P21-201ENST00000502313 581 ntBASIC3.53□□□□□ -1.84
APOEP02649 AC112198.1-201ENST00000505369 1220 ntBASIC3.53□□□□□ -1.84
APOEP02649 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.53□□□□□ -1.84
APOEP02649 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.53□□□□□ -1.84
APOEP02649 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.53□□□□□ -1.84
APOEP02649 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.53□□□□□ -1.84
APOEP02649 RNU2-58P-201ENST00000516403 183 ntBASIC3.53□□□□□ -1.84
APOEP02649 MIR2276-201ENST00000516886 89 ntBASIC3.53□□□□□ -1.84
APOEP02649 AC107934.2-201ENST00000518653 310 ntBASIC3.53□□□□□ -1.84
APOEP02649 AC022790.1-201ENST00000522872 204 ntBASIC3.53□□□□□ -1.84
APOEP02649 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.53□□□□□ -1.84
APOEP02649 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.53□□□□□ -1.84
APOEP02649 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.53□□□□□ -1.84
APOEP02649 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.53□□□□□ -1.84
APOEP02649 TRAV37-201ENST00000553906 342 ntBASIC3.53□□□□□ -1.84
APOEP02649 OR4U1P-201ENST00000554958 912 ntBASIC3.53□□□□□ -1.84
APOEP02649 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.53□□□□□ -1.84
APOEP02649 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.53□□□□□ -1.84
APOEP02649 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.53□□□□□ -1.84
APOEP02649 AC009948.4-201ENST00000604692 675 ntBASIC3.53□□□□□ -1.84
APOEP02649 AC069200.1-201ENST00000609511 323 ntBASIC3.53□□□□□ -1.84
APOEP02649 PLCE1P1-201ENST00000622094 305 ntBASIC3.53□□□□□ -1.84
APOEP02649 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.53□□□□□ -1.84
APOEP02649 AC119674.1-212ENST00000641155 993 ntBASIC3.53□□□□□ -1.84
APOEP02649 HSPA8P19-201ENST00000505359 1517 ntBASIC3.53□□□□□ -1.84
APOEP02649 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.53□□□□□ -1.84
APOEP02649 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.53□□□□□ -1.85
APOEP02649 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.52□□□□□ -1.85
APOEP02649 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.52□□□□□ -1.85
APOEP02649 RNA5SP197-201ENST00000363357 119 ntBASIC3.52□□□□□ -1.85
APOEP02649 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.52□□□□□ -1.85
APOEP02649 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
APOEP02649 SNORD65-201ENST00000391079 73 ntBASIC3.52□□□□□ -1.85
APOEP02649 RANP4-201ENST00000413361 655 ntBASIC3.52□□□□□ -1.85
APOEP02649 LINC01881-201ENST00000416103 412 ntBASIC3.52□□□□□ -1.85
APOEP02649 AL513174.1-201ENST00000423182 629 ntBASIC3.52□□□□□ -1.85
APOEP02649 RPF2P1-201ENST00000424137 906 ntBASIC3.52□□□□□ -1.85
APOEP02649 AC097713.2-201ENST00000430199 356 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms