Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL2A1P02458 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
COL2A1P02458 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.1□□□□□ -1.75
COL2A1P02458 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
COL2A1P02458 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
COL2A1P02458 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL2A1P02458 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL2A1P02458 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL2A1P02458 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
COL2A1P02458 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL2A1P02458 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
COL2A1P02458 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.1□□□□□ -1.75
COL2A1P02458 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL2A1P02458 RPF2P1-201ENST00000424137 906 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 AC006989.1-201ENST00000427212 131 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 AL160175.1-201ENST00000428124 247 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 UBE2V1P1-201ENST00000430836 445 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.1□□□□□ -1.75
COL2A1P02458 MRPS18BP2-201ENST00000434310 759 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
COL2A1P02458 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.1□□□□□ -1.75
COL2A1P02458 RPL21P8-201ENST00000465083 535 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 AC084357.1-201ENST00000473404 255 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 AC037198.2-201ENST00000478845 733 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.1□□□□□ -1.75
COL2A1P02458 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.1□□□□□ -1.75
COL2A1P02458 AC020699.1-201ENST00000505161 445 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.1□□□□□ -1.75
COL2A1P02458 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.1□□□□□ -1.75
COL2A1P02458 IGKV2-26-201ENST00000518305 343 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.1□□□□□ -1.75
COL2A1P02458 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.1□□□□□ -1.75
COL2A1P02458 MRPS36P5-201ENST00000551909 298 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.1□□□□□ -1.75
COL2A1P02458 MIR4509-3-201ENST00000578671 94 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 MIR4509-2-201ENST00000583920 94 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.1□□□□□ -1.75
COL2A1P02458 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.1□□□□□ -1.75
COL2A1P02458 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.1□□□□□ -1.75
COL2A1P02458 AC110760.3-201ENST00000598794 467 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 AC091057.2-201ENST00000602594 792 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 AC012557.2-201ENST00000605919 418 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.1□□□□□ -1.75
COL2A1P02458 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.1□□□□□ -1.75
COL2A1P02458 MIR7112-201ENST00000616126 65 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 MIR4509-1-201ENST00000618224 94 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 AP002967.1-201ENST00000624203 539 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 AC127502.3-201ENST00000636170 1206 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL2A1P02458 AC007656.2-201ENST00000624902 4547 ntBASIC4.1□□□□□ -1.75
COL2A1P02458 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL2A1P02458 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.1□□□□□ -1.75
COL2A1P02458 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
COL2A1P02458 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL2A1P02458 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.09□□□□□ -1.75
COL2A1P02458 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.09□□□□□ -1.75
COL2A1P02458 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL2A1P02458 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL2A1P02458 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
COL2A1P02458 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
COL2A1P02458 MIR448-201ENST00000362131 111 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 SNORA38.1-201ENST00000364172 131 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
COL2A1P02458 U3.19-201ENST00000390893 196 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 AC093719.1-202ENST00000392735 373 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 RPS24P12-201ENST00000402084 394 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 HSPE1P8-201ENST00000406997 288 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.09□□□□□ -1.75
COL2A1P02458 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.09□□□□□ -1.75
COL2A1P02458 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.09□□□□□ -1.75
COL2A1P02458 AC127537.2-201ENST00000439258 465 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.09□□□□□ -1.75
COL2A1P02458 MTND5P8-201ENST00000449817 1083 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.09□□□□□ -1.75
COL2A1P02458 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.09□□□□□ -1.75
COL2A1P02458 PHBP14-201ENST00000512887 367 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.09□□□□□ -1.75
COL2A1P02458 SNORA19.3-201ENST00000516165 130 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 AC104997.1-201ENST00000519761 717 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.09□□□□□ -1.75
COL2A1P02458 AC011611.1-201ENST00000552179 197 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 AC005476.1-201ENST00000554427 397 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 CKS1BP1-201ENST00000555221 240 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.09□□□□□ -1.75
COL2A1P02458 AC034105.3-201ENST00000565294 442 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 AC090666.1-201ENST00000578241 445 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 MIR4276-201ENST00000584832 70 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 AC006504.3-201ENST00000586818 523 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.09□□□□□ -1.75
COL2A1P02458 AC069431.2-201ENST00000604149 1099 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.09□□□□□ -1.75
COL2A1P02458 AC117490.2-201ENST00000610042 594 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 AC096586.1-201ENST00000610267 561 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 MIR4727-201ENST00000622232 55 ntBASIC4.09□□□□□ -1.75
COL2A1P02458 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.09□□□□□ -1.75
COL2A1P02458 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.09□□□□□ -1.75
COL2A1P02458 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.09□□□□□ -1.75
COL2A1P02458 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
COL2A1P02458 SRP72P2-201ENST00000344851 1979 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms