Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AL671309.1-201ENST00000603750 544 ntBASIC3.54□□□□□ -1.84
CLDN9O95484 AC099676.1-201ENST00000608886 657 ntBASIC3.54□□□□□ -1.84
CLDN9O95484 AC090912.3-201ENST00000609775 533 ntBASIC3.54□□□□□ -1.84
CLDN9O95484 AC096586.1-201ENST00000610267 561 ntBASIC3.54□□□□□ -1.84
CLDN9O95484 AL732618.1-201ENST00000623251 301 ntBASIC3.54□□□□□ -1.84
CLDN9O95484 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN9O95484 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN9O95484 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN9O95484 AC107081.3-201ENST00000612715 2034 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN9O95484 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN9O95484 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
CLDN9O95484 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN9O95484 RNU6-792P-201ENST00000363490 107 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 RN7SKP280-201ENST00000364196 304 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 RNA5SP167-201ENST00000365461 116 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN9O95484 DSTNP4-201ENST00000399472 474 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN9O95484 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.53□□□□□ -1.84
CLDN9O95484 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN9O95484 AL389915.1-201ENST00000422463 466 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.53□□□□□ -1.84
CLDN9O95484 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.53□□□□□ -1.84
CLDN9O95484 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN9O95484 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.53□□□□□ -1.84
CLDN9O95484 FABP5P3-201ENST00000437960 408 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 AL645931.1-201ENST00000439737 410 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 HMGN2P21-201ENST00000447764 270 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 snoU13.22-201ENST00000459428 104 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 AL133162.1-201ENST00000463228 453 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CLDN9O95484 GAPDHP36-201ENST00000480688 918 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN9O95484 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN9O95484 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.53□□□□□ -1.84
CLDN9O95484 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN9O95484 AC016065.2-201ENST00000514530 444 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 AC093853.1-201ENST00000515689 483 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 RNU4-60P-201ENST00000517239 135 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 AC104115.2-201ENST00000523026 687 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 AF279873.1-201ENST00000523393 313 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 MED28P5-201ENST00000528254 438 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 OR5AP1P-201ENST00000529730 940 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.53□□□□□ -1.84
CLDN9O95484 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.53□□□□□ -1.84
CLDN9O95484 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN9O95484 AC023161.2-201ENST00000551218 780 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.53□□□□□ -1.84
CLDN9O95484 AC034105.4-201ENST00000568304 277 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 AC106734.1-201ENST00000568646 663 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN9O95484 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN9O95484 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.53□□□□□ -1.84
CLDN9O95484 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.53□□□□□ -1.84
CLDN9O95484 RNU1-30P-201ENST00000606575 163 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.53□□□□□ -1.84
CLDN9O95484 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN9O95484 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN9O95484 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN9O95484 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.53□□□□□ -1.84
CLDN9O95484 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.53□□□□□ -1.84
CLDN9O95484 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
CLDN9O95484 MTND5P3-201ENST00000438536 1800 ntBASIC3.53□□□□□ -1.84
CLDN9O95484 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN9O95484 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
CLDN9O95484 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.53□□□□□ -1.84
CLDN9O95484 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.85
CLDN9O95484 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN9O95484 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CLDN9O95484 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.52□□□□□ -1.85
CLDN9O95484 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CLDN9O95484 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CLDN9O95484 AC073073.2-201ENST00000609827 2578 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN9O95484 OR4A15-201ENST00000314706 1035 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN9O95484 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN9O95484 RNU6-525P-201ENST00000363685 104 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 AL445189.1-201ENST00000405722 338 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 SNORA11.1-201ENST00000408133 129 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 RN7SKP156-201ENST00000410308 342 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 RNU4-27P-201ENST00000410889 139 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 RNU6-272P-201ENST00000411028 104 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.52□□□□□ -1.85
CLDN9O95484 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CLDN9O95484 AL121882.1-201ENST00000422893 417 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 AC002075.2-201ENST00000425207 252 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 AC017083.1-201ENST00000428093 483 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 AL513175.1-201ENST00000431492 780 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 MRPS18BP2-201ENST00000434310 759 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 Z77249.1-201ENST00000444622 1175 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 MTND1P33-201ENST00000446251 917 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 AL353718.1-201ENST00000451028 517 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 ANP32BP2-201ENST00000454525 545 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 RPS3AP50-201ENST00000487064 803 ntBASIC3.52□□□□□ -1.85
CLDN9O95484 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CLDN9O95484 AC025768.1-201ENST00000510057 267 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms