Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 RNU1-32P-201ENST00000363937 159 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 Y_RNA.248-201ENST00000364501 109 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 SNORA62-201ENST00000365493 153 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 SNORA40.3-201ENST00000390964 122 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 Y_RNA.582-201ENST00000391023 95 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
OPHN1O60890 VN1R8P-201ENST00000407739 893 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 RNU2-50P-201ENST00000410494 143 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 AC008280.1-201ENST00000418851 412 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.17□□□□□ -1.58
OPHN1O60890 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.17□□□□□ -1.58
OPHN1O60890 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.17□□□□□ -1.58
OPHN1O60890 DNAJC19P7-201ENST00000428811 344 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 RPL37P1-201ENST00000432310 284 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 RPL37P21-201ENST00000435890 276 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 RPS29P9-201ENST00000440360 171 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.17□□□□□ -1.58
OPHN1O60890 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.17□□□□□ -1.58
OPHN1O60890 AL358832.1-201ENST00000497800 389 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
OPHN1O60890 AC026412.2-201ENST00000512270 1075 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 RNU6-347P-201ENST00000516658 105 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 RN7SKP96-201ENST00000516948 297 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 NRON-201ENST00000517270 370 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 PAICSP4-201ENST00000517543 1253 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.17□□□□□ -1.58
OPHN1O60890 RPL23AP53-201ENST00000521854 457 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
OPHN1O60890 DEFB108A-201ENST00000530110 222 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.17□□□□□ -1.58
OPHN1O60890 AC068587.4-201ENST00000533893 186 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.17□□□□□ -1.58
OPHN1O60890 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.17□□□□□ -1.58
OPHN1O60890 EEF1B2P4-201ENST00000551398 348 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.17□□□□□ -1.58
OPHN1O60890 ZNF519P2-201ENST00000557032 169 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 TPRKBP2-201ENST00000565969 475 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.17□□□□□ -1.58
OPHN1O60890 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.17□□□□□ -1.58
OPHN1O60890 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.17□□□□□ -1.58
OPHN1O60890 OR4G1P-201ENST00000588632 938 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 AC022106.2-201ENST00000620114 757 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 AL603839.4-201ENST00000624658 1005 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.17□□□□□ -1.58
OPHN1O60890 OR5AK4P-201ENST00000635912 903 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.17□□□□□ -1.58
OPHN1O60890 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.17□□□□□ -1.58
OPHN1O60890 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
OPHN1O60890 DCAF13P1-201ENST00000495256 1330 ntBASIC5.17□□□□□ -1.58
OPHN1O60890 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
OPHN1O60890 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
OPHN1O60890 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.17□□□□□ -1.58
OPHN1O60890 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
OPHN1O60890 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
OPHN1O60890 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
OPHN1O60890 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.16□□□□□ -1.58
OPHN1O60890 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
OPHN1O60890 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
OPHN1O60890 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
OPHN1O60890 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
OPHN1O60890 OR4A15-201ENST00000314706 1035 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
OPHN1O60890 RN7SKP95-201ENST00000362860 303 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 RNU6-398P-201ENST00000384143 109 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
OPHN1O60890 U8.14-201ENST00000390843 143 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
OPHN1O60890 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
OPHN1O60890 SNORA11-201ENST00000408789 128 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.16□□□□□ -1.58
OPHN1O60890 CHEK2P3-201ENST00000416118 248 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 USP9YP13-201ENST00000417797 480 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 AIMP1P1-201ENST00000418670 937 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 Z97055.1-201ENST00000419730 712 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 SDCBPP2-201ENST00000424643 885 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
OPHN1O60890 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.16□□□□□ -1.58
OPHN1O60890 BX323845.1-201ENST00000432417 179 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 AL596276.1-201ENST00000434465 418 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 DNAJC19P4-201ENST00000440115 345 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 RBMX2P4-201ENST00000441256 376 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 AC244505.5-201ENST00000443639 207 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.16□□□□□ -1.58
OPHN1O60890 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.16□□□□□ -1.58
OPHN1O60890 KNOP1P3-201ENST00000446933 426 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 BTF3P6-201ENST00000448054 499 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 RPL39P6-201ENST00000448289 150 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.16□□□□□ -1.58
OPHN1O60890 AL354710.1-201ENST00000453641 246 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 AL591473.1-201ENST00000464297 313 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 AC092757.1-201ENST00000467293 467 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 AC023424.2-201ENST00000493479 777 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.16□□□□□ -1.58
OPHN1O60890 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.16□□□□□ -1.58
OPHN1O60890 AC093809.1-201ENST00000509155 340 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 KRT19P6-201ENST00000510983 209 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 AF131216.2-201ENST00000512316 564 ntBASIC5.16□□□□□ -1.58
OPHN1O60890 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.16□□□□□ -1.58
OPHN1O60890 MED28P5-201ENST00000528254 438 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms