Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.72□□□□□ -1.65
PROM1O43490 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.72□□□□□ -1.65
PROM1O43490 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.72□□□□□ -1.65
PROM1O43490 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.72□□□□□ -1.65
PROM1O43490 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.72□□□□□ -1.65
PROM1O43490 AC004865.1-201ENST00000442276 1003 ntBASIC4.72□□□□□ -1.65
PROM1O43490 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.72□□□□□ -1.65
PROM1O43490 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.72□□□□□ -1.65
PROM1O43490 BTF3P6-201ENST00000448054 499 ntBASIC4.72□□□□□ -1.65
PROM1O43490 NANOGNBP1-201ENST00000448444 480 ntBASIC4.72□□□□□ -1.65
PROM1O43490 RPL7P31-201ENST00000450192 724 ntBASIC4.72□□□□□ -1.65
PROM1O43490 AC093392.2-201ENST00000450682 337 ntBASIC4.72□□□□□ -1.65
PROM1O43490 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PROM1O43490 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.72□□□□□ -1.65
PROM1O43490 OR4G11P-201ENST00000492842 939 ntBASIC4.72□□□□□ -1.65
PROM1O43490 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.72□□□□□ -1.65
PROM1O43490 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.72□□□□□ -1.65
PROM1O43490 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.72□□□□□ -1.65
PROM1O43490 RNA5SP464-201ENST00000516251 108 ntBASIC4.72□□□□□ -1.65
PROM1O43490 AC008562.1-201ENST00000521763 330 ntBASIC4.72□□□□□ -1.65
PROM1O43490 AC087276.1-201ENST00000529659 480 ntBASIC4.72□□□□□ -1.65
PROM1O43490 OR4A45P-201ENST00000529954 901 ntBASIC4.72□□□□□ -1.65
PROM1O43490 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.72□□□□□ -1.65
PROM1O43490 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.72□□□□□ -1.65
PROM1O43490 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.72□□□□□ -1.65
PROM1O43490 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.72□□□□□ -1.65
PROM1O43490 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.72□□□□□ -1.65
PROM1O43490 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.72□□□□□ -1.65
PROM1O43490 MIR4528-201ENST00000577763 90 ntBASIC4.72□□□□□ -1.65
PROM1O43490 MIR3934-201ENST00000579806 107 ntBASIC4.72□□□□□ -1.65
PROM1O43490 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.72□□□□□ -1.65
PROM1O43490 MIR4691-201ENST00000583764 85 ntBASIC4.72□□□□□ -1.65
PROM1O43490 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.72□□□□□ -1.65
PROM1O43490 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.72□□□□□ -1.65
PROM1O43490 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.72□□□□□ -1.65
PROM1O43490 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.72□□□□□ -1.65
PROM1O43490 AC109347.2-201ENST00000610220 349 ntBASIC4.72□□□□□ -1.65
PROM1O43490 AL008636.1-201ENST00000625038 1018 ntBASIC4.72□□□□□ -1.65
PROM1O43490 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.72□□□□□ -1.65
PROM1O43490 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PROM1O43490 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.72□□□□□ -1.65
PROM1O43490 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.72□□□□□ -1.65
PROM1O43490 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PROM1O43490 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PROM1O43490 MAPK10-286ENST00000641208 8747 ntBASIC4.72□□□□□ -1.65
PROM1O43490 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.72□□□□□ -1.65
PROM1O43490 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PROM1O43490 AC126323.6-202ENST00000568092 3511 ntBASIC4.72□□□□□ -1.65
PROM1O43490 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.72□□□□□ -1.65
PROM1O43490 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.72□□□□□ -1.65
PROM1O43490 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.72□□□□□ -1.65
PROM1O43490 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
PROM1O43490 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.71□□□□□ -1.65
PROM1O43490 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
PROM1O43490 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.71□□□□□ -1.66
PROM1O43490 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.71□□□□□ -1.66
PROM1O43490 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
PROM1O43490 AC095050.2-201ENST00000510748 1458 ntBASIC4.71□□□□□ -1.66
PROM1O43490 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.71□□□□□ -1.66
PROM1O43490 AC012618.3-205ENST00000637896 1496 ntBASIC4.71□□□□□ -1.66
PROM1O43490 AL031985.3-201ENST00000565390 2449 ntBASIC4.71□□□□□ -1.66
PROM1O43490 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PROM1O43490 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.71□□□□□ -1.66
PROM1O43490 RNU5F-6P-201ENST00000362979 116 ntBASIC4.71□□□□□ -1.66
PROM1O43490 RNU6-433P-201ENST00000363216 104 ntBASIC4.71□□□□□ -1.66
PROM1O43490 RNU5E-4P-201ENST00000364931 120 ntBASIC4.71□□□□□ -1.66
PROM1O43490 RNA5SP428-201ENST00000365129 132 ntBASIC4.71□□□□□ -1.66
PROM1O43490 RNU6-723P-201ENST00000383973 107 ntBASIC4.71□□□□□ -1.66
PROM1O43490 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PROM1O43490 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.71□□□□□ -1.66
PROM1O43490 RAB28P1-201ENST00000411517 641 ntBASIC4.71□□□□□ -1.66
PROM1O43490 AC109780.2-201ENST00000413467 845 ntBASIC4.71□□□□□ -1.66
PROM1O43490 HMGB1P11-201ENST00000413899 637 ntBASIC4.71□□□□□ -1.66
PROM1O43490 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.71□□□□□ -1.66
PROM1O43490 FCF1P2-201ENST00000415284 583 ntBASIC4.71□□□□□ -1.66
PROM1O43490 AC092634.6-201ENST00000418558 192 ntBASIC4.71□□□□□ -1.66
PROM1O43490 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.71□□□□□ -1.66
PROM1O43490 DYNLL1P7-201ENST00000429273 258 ntBASIC4.71□□□□□ -1.66
PROM1O43490 RBMY2QP-201ENST00000429799 1147 ntBASIC4.71□□□□□ -1.66
PROM1O43490 B3GNT2P1-201ENST00000434960 952 ntBASIC4.71□□□□□ -1.66
PROM1O43490 RHOT1P3-201ENST00000436571 331 ntBASIC4.71□□□□□ -1.66
PROM1O43490 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.71□□□□□ -1.66
PROM1O43490 PDSS1P2-201ENST00000449397 678 ntBASIC4.71□□□□□ -1.66
PROM1O43490 RPL18AP17-201ENST00000455326 198 ntBASIC4.71□□□□□ -1.66
PROM1O43490 NF1P3-201ENST00000457709 450 ntBASIC4.71□□□□□ -1.66
PROM1O43490 AP000797.1-201ENST00000478870 387 ntBASIC4.71□□□□□ -1.66
PROM1O43490 AC093267.1-201ENST00000489176 961 ntBASIC4.71□□□□□ -1.66
PROM1O43490 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.71□□□□□ -1.66
PROM1O43490 MTCYBP17-201ENST00000503579 789 ntBASIC4.71□□□□□ -1.66
PROM1O43490 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.71□□□□□ -1.66
PROM1O43490 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.71□□□□□ -1.66
PROM1O43490 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.71□□□□□ -1.66
PROM1O43490 RNU6-718P-201ENST00000516166 105 ntBASIC4.71□□□□□ -1.66
PROM1O43490 HMGB1P19-201ENST00000517578 577 ntBASIC4.71□□□□□ -1.66
PROM1O43490 RPL23AP53-201ENST00000521854 457 ntBASIC4.71□□□□□ -1.66
PROM1O43490 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.71□□□□□ -1.66
PROM1O43490 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.71□□□□□ -1.66
PROM1O43490 BRD9P1-201ENST00000529855 560 ntBASIC4.71□□□□□ -1.66
PROM1O43490 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.71□□□□□ -1.66
PROM1O43490 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms