Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN3O15551 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN3O15551 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN3O15551 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CLDN3O15551 AL031985.3-201ENST00000565390 2449 ntBASIC3.97□□□□□ -1.77
CLDN3O15551 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.97□□□□□ -1.77
CLDN3O15551 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN3O15551 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN3O15551 AL627171.1-201ENST00000618845 1308 ntBASIC3.97□□□□□ -1.77
CLDN3O15551 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CLDN3O15551 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.97□□□□□ -1.77
CLDN3O15551 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN3O15551 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN3O15551 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN3O15551 RNA5SP167-201ENST00000365461 116 ntBASIC3.97□□□□□ -1.77
CLDN3O15551 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN3O15551 BTBD10P2-201ENST00000404779 676 ntBASIC3.97□□□□□ -1.77
CLDN3O15551 SNORA11C-201ENST00000408532 129 ntBASIC3.97□□□□□ -1.77
CLDN3O15551 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN3O15551 AC241520.1-201ENST00000422654 1099 ntBASIC3.97□□□□□ -1.77
CLDN3O15551 YWHAZP8-201ENST00000436935 731 ntBASIC3.97□□□□□ -1.77
CLDN3O15551 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN3O15551 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN3O15551 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN3O15551 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN3O15551 SNORD105B-201ENST00000458770 79 ntBASIC3.97□□□□□ -1.77
CLDN3O15551 AC007537.2-201ENST00000472093 511 ntBASIC3.97□□□□□ -1.77
CLDN3O15551 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.97□□□□□ -1.77
CLDN3O15551 AC104619.4-201ENST00000510773 249 ntBASIC3.97□□□□□ -1.77
CLDN3O15551 RNA5SP309-201ENST00000516670 106 ntBASIC3.97□□□□□ -1.77
CLDN3O15551 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.97□□□□□ -1.77
CLDN3O15551 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.97□□□□□ -1.77
CLDN3O15551 AC104115.2-201ENST00000523026 687 ntBASIC3.97□□□□□ -1.77
CLDN3O15551 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.97□□□□□ -1.77
CLDN3O15551 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN3O15551 AC015911.5-201ENST00000587076 451 ntBASIC3.97□□□□□ -1.77
CLDN3O15551 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.97□□□□□ -1.77
CLDN3O15551 AC020914.6-201ENST00000594327 272 ntBASIC3.97□□□□□ -1.77
CLDN3O15551 AC010591.1-201ENST00000603941 649 ntBASIC3.97□□□□□ -1.77
CLDN3O15551 AL021368.1-201ENST00000607490 540 ntBASIC3.97□□□□□ -1.77
CLDN3O15551 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.97□□□□□ -1.77
CLDN3O15551 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN3O15551 MTND4P8-201ENST00000514997 1362 ntBASIC3.97□□□□□ -1.77
CLDN3O15551 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN3O15551 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN3O15551 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN3O15551 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN3O15551 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CLDN3O15551 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CLDN3O15551 AC090337.1-201ENST00000579651 2074 ntBASIC3.96□□□□□ -1.77
CLDN3O15551 MIR525-201ENST00000384978 85 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CLDN3O15551 MTHFD2P2-201ENST00000407725 247 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 RNU6-272P-201ENST00000411028 104 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN3O15551 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN3O15551 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.96□□□□□ -1.78
CLDN3O15551 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.96□□□□□ -1.78
CLDN3O15551 SKP1P1-201ENST00000438081 489 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 AC009263.1-201ENST00000441193 1239 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 RPL23AP33-201ENST00000442301 452 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 AP000873.1-201ENST00000463987 400 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 AC146507.1-201ENST00000468335 354 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 AC106707.2-201ENST00000484182 374 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN3O15551 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.96□□□□□ -1.78
CLDN3O15551 AC025768.1-201ENST00000510057 267 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 RN7SKP83-201ENST00000516512 178 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.96□□□□□ -1.78
CLDN3O15551 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.96□□□□□ -1.78
CLDN3O15551 AP003717.3-201ENST00000544832 1180 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN3O15551 AC023161.2-201ENST00000551218 780 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 AC104229.1-201ENST00000561364 255 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN3O15551 MIR4429-201ENST00000580105 73 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN3O15551 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN3O15551 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN3O15551 YWHAQP7-201ENST00000603536 658 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN3O15551 SNORA51-201ENST00000606420 132 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 AC112503.2-201ENST00000609005 552 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 AC096586.1-201ENST00000610267 561 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 AL109659.3-201ENST00000624985 950 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 AC138649.5-201ENST00000637456 137 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN3O15551 AC009093.8-201ENST00000641769 292 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN3O15551 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN3O15551 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CLDN3O15551 EXOC5P1-201ENST00000510543 1969 ntBASIC3.96□□□□□ -1.78
CLDN3O15551 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN3O15551 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN3O15551 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN3O15551 MTND5P3-201ENST00000438536 1800 ntBASIC3.95□□□□□ -1.78
CLDN3O15551 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CLDN3O15551 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN3O15551 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN3O15551 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms