Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC007954.1-201ENST00000554198 494 ntBASIC4.86□□□□□ -1.63
FOXN3O00409 MTCYBP33-201ENST00000575007 1130 ntBASIC4.86□□□□□ -1.63
FOXN3O00409 MIR4480-201ENST00000582492 71 ntBASIC4.86□□□□□ -1.63
FOXN3O00409 SLC25A36P1-201ENST00000590111 465 ntBASIC4.86□□□□□ -1.63
FOXN3O00409 AC083899.3-201ENST00000603413 594 ntBASIC4.86□□□□□ -1.63
FOXN3O00409 AC103792.1-201ENST00000603591 919 ntBASIC4.86□□□□□ -1.63
FOXN3O00409 AL133338.2-201ENST00000604292 736 ntBASIC4.86□□□□□ -1.63
FOXN3O00409 AL159169.3-201ENST00000608871 561 ntBASIC4.86□□□□□ -1.63
FOXN3O00409 uc_338.18-201ENST00000615451 175 ntBASIC4.86□□□□□ -1.63
FOXN3O00409 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.86□□□□□ -1.63
FOXN3O00409 AL031667.3-201ENST00000620124 655 ntBASIC4.86□□□□□ -1.63
FOXN3O00409 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.86□□□□□ -1.63
FOXN3O00409 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.86□□□□□ -1.63
FOXN3O00409 U6.101-201ENST00000637707 76 ntBASIC4.86□□□□□ -1.63
FOXN3O00409 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
FOXN3O00409 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
FOXN3O00409 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
FOXN3O00409 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
FOXN3O00409 AL445523.1-201ENST00000451184 1362 ntBASIC4.86□□□□□ -1.63
FOXN3O00409 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
FOXN3O00409 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
FOXN3O00409 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
FOXN3O00409 MAPK10-263ENST00000641052 4307 ntBASIC4.86□□□□□ -1.63
FOXN3O00409 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.86□□□□□ -1.63
FOXN3O00409 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
FOXN3O00409 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
FOXN3O00409 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
FOXN3O00409 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
FOXN3O00409 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
FOXN3O00409 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
FOXN3O00409 CPHL1P-201ENST00000461341 3407 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 AL356489.2-201ENST00000566968 3528 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
FOXN3O00409 RNU6-374P-201ENST00000364146 108 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
FOXN3O00409 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
FOXN3O00409 MIR298-201ENST00000401212 88 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.85□□□□□ -1.63
FOXN3O00409 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.85□□□□□ -1.63
FOXN3O00409 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.85□□□□□ -1.63
FOXN3O00409 RPL23AP93-201ENST00000440847 484 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 ARL4AP3-201ENST00000441452 574 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.85□□□□□ -1.63
FOXN3O00409 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.85□□□□□ -1.63
FOXN3O00409 AC104073.1-201ENST00000451988 151 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 AL645939.1-201ENST00000453429 797 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 TPTE2P5-203ENST00000458118 728 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 AC010326.1-201ENST00000462726 602 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 PLGLA-201ENST00000465668 449 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 RPL7P1-201ENST00000468161 747 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 RPL7P9-201ENST00000468715 747 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 AC022795.1-201ENST00000473808 480 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 AC090013.1-201ENST00000485147 480 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 AC092045.1-201ENST00000495716 1231 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.85□□□□□ -1.63
FOXN3O00409 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.85□□□□□ -1.63
FOXN3O00409 GSTP1P1-201ENST00000548078 319 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.85□□□□□ -1.63
FOXN3O00409 CYCSP2-201ENST00000558168 301 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 AP005136.1-201ENST00000579765 429 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.85□□□□□ -1.63
FOXN3O00409 AC067852.4-201ENST00000590314 478 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.85□□□□□ -1.63
FOXN3O00409 BPIFA4P-203ENST00000603168 689 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.85□□□□□ -1.63
FOXN3O00409 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
FOXN3O00409 AC008443.7-201ENST00000622195 246 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.85□□□□□ -1.63
FOXN3O00409 AC098679.4-201ENST00000624241 654 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 AC092192.1-201ENST00000633154 1018 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.85□□□□□ -1.63
FOXN3O00409 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
FOXN3O00409 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.85□□□□□ -1.63
FOXN3O00409 AC011477.1-204ENST00000623416 1325 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 MTND4P34-201ENST00000572715 1371 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.85□□□□□ -1.63
FOXN3O00409 AP002907.1-201ENST00000606361 1430 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
FOXN3O00409 AL133412.1-201ENST00000380194 2992 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 AL136964.1-201ENST00000622038 2990 ntBASIC4.85□□□□□ -1.63
FOXN3O00409 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.85□□□□□ -1.63
FOXN3O00409 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
FOXN3O00409 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
FOXN3O00409 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.63
FOXN3O00409 ELL2P3-201ENST00000457883 1602 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 LINC00622-201ENST00000562811 1570 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.84□□□□□ -1.63
FOXN3O00409 AC092435.4-201ENST00000623012 4159 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 AL122126.1-201ENST00000546905 1318 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
FOXN3O00409 SNORA71.2-201ENST00000364941 134 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
FOXN3O00409 RNU1-63P-201ENST00000383902 164 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 SNORA51.6-201ENST00000384151 125 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
FOXN3O00409 GLULP6-201ENST00000399502 913 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.84□□□□□ -1.63
FOXN3O00409 RN7SKP182-201ENST00000410772 298 ntBASIC4.84□□□□□ -1.63
FOXN3O00409 RNU6-920P-201ENST00000410926 92 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms