Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
PDLIM1O00151 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
PDLIM1O00151 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM1O00151 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM1O00151 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PDLIM1O00151 AC007496.3-201ENST00000624987 3443 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 AL512646.1-201ENST00000269395 1077 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM1O00151 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM1O00151 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.72□□□□□ -1.81
PDLIM1O00151 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM1O00151 MIR591-201ENST00000385290 95 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 SNORA48.8-201ENST00000391324 134 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 RNU2-37P-201ENST00000410695 177 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 RN7SKP182-201ENST00000410772 298 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 RPS7P13-201ENST00000413955 498 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 COX6CP15-201ENST00000426313 211 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 RPL21P110-201ENST00000433345 446 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 HMGB1P45-201ENST00000435986 653 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 RPL23AP46-201ENST00000438548 490 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 AL138799.3-201ENST00000438968 350 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 AC002542.1-201ENST00000440683 193 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.72□□□□□ -1.81
PDLIM1O00151 AL929288.2-201ENST00000446368 407 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 OR51B8P-201ENST00000449892 769 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 PTGES3P5-201ENST00000455109 434 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 AC008280.2-201ENST00000455473 307 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 BX248409.1-201ENST00000455497 255 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.72□□□□□ -1.81
PDLIM1O00151 HMGB3P30-201ENST00000457863 606 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 RNA5SP246-201ENST00000458909 119 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 AP000873.1-201ENST00000463987 400 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.72□□□□□ -1.81
PDLIM1O00151 RN7SL271P-201ENST00000487601 295 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 RPL29P14-201ENST00000495837 428 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM1O00151 PRELID3BP4-201ENST00000515476 571 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 RNU2-58P-201ENST00000516403 183 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.72□□□□□ -1.81
PDLIM1O00151 OR4T1P-201ENST00000554933 911 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 CENPUP2-201ENST00000555897 1186 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 AC010735.1-201ENST00000567305 1026 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 BNIP3P31-201ENST00000604515 566 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 ARF4P1-201ENST00000605447 541 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.72□□□□□ -1.81
PDLIM1O00151 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM1O00151 AP003476.1-201ENST00000623984 516 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM1O00151 MTCO1P6-201ENST00000481192 1384 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 AC005261.4-201ENST00000600047 1385 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 AL133383.2-201ENST00000622958 2336 ntBASIC3.72□□□□□ -1.81
PDLIM1O00151 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM1O00151 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM1O00151 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM1O00151 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PDLIM1O00151 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
PDLIM1O00151 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PDLIM1O00151 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PDLIM1O00151 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PDLIM1O00151 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
PDLIM1O00151 RNU6-932P-201ENST00000391108 106 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PDLIM1O00151 HSPE1P8-201ENST00000406997 288 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 MIR1251-201ENST00000408552 70 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.71□□□□□ -1.82
PDLIM1O00151 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.71□□□□□ -1.82
PDLIM1O00151 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.71□□□□□ -1.82
PDLIM1O00151 AC012498.1-201ENST00000424037 437 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 COX6B1P7-201ENST00000430845 235 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.71□□□□□ -1.82
PDLIM1O00151 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.71□□□□□ -1.82
PDLIM1O00151 SETP5-201ENST00000437270 562 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 AL645931.1-201ENST00000439737 410 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 HMGB1P48-201ENST00000446155 598 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 MTND1P33-201ENST00000446251 917 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.71□□□□□ -1.82
PDLIM1O00151 MTND2P39-201ENST00000457230 764 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 AC104689.1-201ENST00000473356 768 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 SNX5P1-201ENST00000505757 1041 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.71□□□□□ -1.82
PDLIM1O00151 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.71□□□□□ -1.82
PDLIM1O00151 AC010265.1-201ENST00000513509 211 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.71□□□□□ -1.82
PDLIM1O00151 MRPL49P2-201ENST00000521066 465 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 AC124293.1-201ENST00000530034 493 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 AC105233.3-201ENST00000531125 744 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.71□□□□□ -1.82
PDLIM1O00151 AC011602.1-201ENST00000546484 331 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 SERPINE4P-201ENST00000554978 281 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.71□□□□□ -1.82
PDLIM1O00151 PARP1P2-201ENST00000556806 195 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 TVP23BP1-201ENST00000557500 617 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 ZNF192P1-203ENST00000565888 810 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.71□□□□□ -1.82
PDLIM1O00151 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.71□□□□□ -1.82
PDLIM1O00151 AC006116.7-201ENST00000590141 756 ntBASIC3.71□□□□□ -1.82
PDLIM1O00151 VN1R88P-201ENST00000596787 292 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms