Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 MFSD8-236ENST00000641509 4050 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 AC119744.1-201ENST00000454746 1715 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 UBE3AP2-201ENST00000429033 2259 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 RNA5SP51-201ENST00000364750 119 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 RSL24D1P1-201ENST00000404972 493 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 SNORA11C-201ENST00000408532 129 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 RNU2-65P-201ENST00000410162 185 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 AC092638.1-201ENST00000411966 1275 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 AC234782.4-201ENST00000417646 1048 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 AC114814.2-201ENST00000419195 485 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 OR5AW1P-201ENST00000426334 1006 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 HSPD1P21-201ENST00000436541 245 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 SNORA71B-202ENST00000439232 272 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 TPTE2P3-201ENST00000441562 1189 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 SEPT14P24-201ENST00000447236 180 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 PDSS1P2-201ENST00000449397 678 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 CDC42P1-201ENST00000456658 548 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 AL133477.1-201ENST00000457472 514 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 RNU7-140P-201ENST00000459546 60 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 AC018635.1-201ENST00000468292 1030 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 RPL7P49-201ENST00000471402 708 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 AC026414.1-201ENST00000504046 698 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 AC006499.5-201ENST00000505037 514 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 SUMO2P5-201ENST00000506790 245 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 AC010306.1-201ENST00000523223 1117 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 AP000619.3-201ENST00000535634 1127 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 AC023824.3-201ENST00000569003 562 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 AC009318.3-201ENST00000616916 503 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 AC079684.1-201ENST00000621405 437 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 AL121594.5-201ENST00000631724 573 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 AC099654.8-201ENST00000637757 681 ntBASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NEDD8-MDP1E9PL57 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 SNORA63.1-201ENST00000362493 131 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 SNORD46.1-201ENST00000364139 104 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 RNU6-353P-201ENST00000364266 108 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 RNU6-146P-201ENST00000384602 108 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 MIR122-201ENST00000385044 85 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 SOD2P1-201ENST00000396543 562 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 DNAJC19P6-201ENST00000401853 280 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 RPL31P52-201ENST00000407532 367 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 CRYBB2P1-203ENST00000415709 538 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AC068533.1-201ENST00000418542 415 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AL929288.2-201ENST00000446368 407 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 RPS3AP46-201ENST00000448352 682 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 snoU13.22-201ENST00000459428 104 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AC104982.1-201ENST00000478775 574 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AC008427.1-201ENST00000503102 655 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 DUXAP2-201ENST00000519198 589 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AC006518.2-201ENST00000542513 940 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms