Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AP002782.1-201ENST00000623107 614 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AP003485.2-201ENST00000623636 610 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 CR381670.1-201ENST00000624291 1693 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AC027290.2-201ENST00000623210 18662 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AC104446.1-201ENST00000613728 1321 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 SNORA70.2-201ENST00000364506 135 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AL079342.2-201ENST00000403367 482 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 SNORA11C-201ENST00000408532 129 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 RNU6-77P-201ENST00000410554 91 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 COX6CP17-201ENST00000421389 185 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 OR4F13P-201ENST00000428478 931 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 MTCO3P21-201ENST00000430791 643 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 NPM1P13-201ENST00000452663 865 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 NUTF2P7-201ENST00000453086 375 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AC004263.1-201ENST00000479327 332 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 UBA52P3-201ENST00000491303 382 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 RN7SL323P-201ENST00000494712 295 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AC005351.1-201ENST00000511152 786 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 RN7SKP83-201ENST00000516512 178 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AC008489.1-201ENST00000524271 483 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AL121576.1-201ENST00000556055 276 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AC087499.8-201ENST00000578406 226 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 ELOCP28-201ENST00000590044 317 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 VN1R78P-201ENST00000597393 564 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AL008729.2-201ENST00000606393 473 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 RNU1-30P-201ENST00000606575 163 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AC090948.2-201ENST00000607363 564 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AC097065.2-201ENST00000608159 533 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AL354760.1-201ENST00000608357 643 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AC026368.1-201ENST00000614934 690 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 MIR6875-201ENST00000617506 72 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 ZYXP1-201ENST00000617638 118 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AC139769.3-201ENST00000618383 175 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 U6.48-201ENST00000618523 106 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 AL158163.2-201ENST00000619110 700 ntBASIC4.04□□□□□ -1.76
SIX2Q9NPC8 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SIX2Q9NPC8 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 SNORA40.2-201ENST00000390847 128 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 RN7SKP247-201ENST00000411094 308 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 OR4K6P-201ENST00000416478 897 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 ELOCP9-201ENST00000418624 239 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 RPF2P1-201ENST00000424137 906 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 PTENP1-201ENST00000447117 1215 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 TPT1P12-201ENST00000448968 492 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AC006480.1-201ENST00000449887 378 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 MRPL35P4-201ENST00000453682 566 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AC010307.1-201ENST00000467206 836 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AC022034.3-201ENST00000471393 478 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AC073522.1-201ENST00000483312 377 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 VN1R105P-201ENST00000486595 910 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 IGJP1-201ENST00000522682 475 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AC008011.1-201ENST00000545989 227 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AC145350.1-201ENST00000567426 208 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms