Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.59□□□□□ -1.52
SSU72Q9NP77 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
SSU72Q9NP77 AF287957.1-201ENST00000607368 1595 ntBASIC5.59□□□□□ -1.52
SSU72Q9NP77 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SSU72Q9NP77 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSU72Q9NP77 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSU72Q9NP77 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSU72Q9NP77 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSU72Q9NP77 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 Y_RNA.145-201ENST00000363527 102 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 Y_RNA.422-201ENST00000384054 114 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 SNORD56.6-201ENST00000384569 71 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 MIR649-201ENST00000384843 97 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 HMGB3P7-201ENST00000400214 611 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC119618.1-201ENST00000434191 222 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 PPIAP13-201ENST00000434706 478 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC073415.1-201ENST00000449240 153 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC006480.1-201ENST00000449887 378 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC130509.1-201ENST00000464158 433 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC078785.3-201ENST00000476607 425 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 COX6B1P2-201ENST00000489624 230 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC011005.3-201ENST00000491624 395 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 TMEM248P1-201ENST00000510579 951 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC005741.1-201ENST00000511094 432 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC093677.1-201ENST00000514414 678 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 IGLV3-24-201ENST00000517477 197 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 TRIM51DP-201ENST00000529746 596 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 OR4R1P-201ENST00000529879 463 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC027369.5-201ENST00000533838 755 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC093012.1-202ENST00000549403 582 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC098848.2-201ENST00000588023 330 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC015819.1-201ENST00000613588 663 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC093913.1-201ENST00000614178 329 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC134882.1-201ENST00000603738 1676 ntBASIC5.58□□□□□ -1.52
SSU72Q9NP77 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSU72Q9NP77 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSU72Q9NP77 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSU72Q9NP77 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SSU72Q9NP77 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSU72Q9NP77 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSU72Q9NP77 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSU72Q9NP77 AC114546.3-201ENST00000623582 1734 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 AC105074.1-201ENST00000623380 3095 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 AC092447.10-201ENST00000620607 1652 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSU72Q9NP77 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSU72Q9NP77 RNU6-996P-201ENST00000365438 107 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 RNU4-20P-201ENST00000365601 151 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 SNORD116-29-201ENST00000384516 83 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 RPL7P60-201ENST00000397636 735 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 AC009161.1-201ENST00000417306 376 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 AL121776.1-201ENST00000429337 372 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.57□□□□□ -1.52
SSU72Q9NP77 AL022324.2-201ENST00000434827 780 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 AL450996.1-201ENST00000445574 1202 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 SLC25A18P1-201ENST00000449385 454 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 AC005297.2-201ENST00000450430 606 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 MTND3P16-201ENST00000452205 344 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 Y_RNA.631-201ENST00000459607 101 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 MTCO2P29-201ENST00000465212 189 ntBASIC5.57□□□□□ -1.52
SSU72Q9NP77 RPS17P15-201ENST00000475609 349 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms