Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 GSTA8P-201ENST00000404253 637 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 HMGB3P18-201ENST00000406327 590 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 AC069218.2-201ENST00000411665 344 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 AC000041.1-201ENST00000439655 175 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 HMGN1P18-201ENST00000457642 277 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 AC068305.1-201ENST00000497406 726 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 AL137843.1-201ENST00000605078 385 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 RMST_8.1-201ENST00000610287 165 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 AC004972.1-201ENST00000623934 2209 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 AL645568.2-201ENST00000432815 1337 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 SNORA11.2-201ENST00000408318 127 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 SNORA81-201ENST00000408493 178 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 RPL32P35-201ENST00000415214 394 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 AC099336.2-201ENST00000422457 254 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 AJ239321.1-201ENST00000424255 564 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 OR6C71P-201ENST00000432580 913 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 CST9LP2-201ENST00000437612 320 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 AC006539.3-201ENST00000454258 129 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 AC010468.1-201ENST00000461022 817 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 TRBV8-2-201ENST00000475637 270 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 AC080014.1-201ENST00000496877 1201 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 OR4C2P-201ENST00000530855 1064 ntBASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 OR10AB1P-202ENST00000641219 1686 ntBASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 MIR634-201ENST00000385208 97 ntBASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 RANP4-201ENST00000413361 655 ntBASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 MTND2P2-201ENST00000434633 945 ntBASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 AC087312.1-201ENST00000471411 480 ntBASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 AC020893.1-201ENST00000502452 580 ntBASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 AC007336.1-201ENST00000576365 3828 ntBASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 AC006539.2-201ENST00000601729 572 ntBASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 OR6R2P-201ENST00000609216 300 ntBASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 AL049555.1-201ENST00000562834 1933 ntBASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
KIAA1549Q9HCM3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 SNORD6-201ENST00000365444 73 ntBASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 AC022022.1-201ENST00000430304 178 ntBASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 ELOCP10-201ENST00000440624 327 ntBASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 RPL37P3-201ENST00000456825 293 ntBASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 RPL7P48-201ENST00000461513 746 ntBASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 AC092045.1-201ENST00000495716 1231 ntBASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 GMPSP1-201ENST00000514075 579 ntBASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 SNORD116-26-201ENST00000516006 96 ntBASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 VTA1P2-201ENST00000520205 911 ntBASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 AL121603.1-201ENST00000553815 142 ntBASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 AC123786.2-201ENST00000603459 275 ntBASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 ELOCP34-201ENST00000604436 327 ntBASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 AC124312.4-201ENST00000605533 310 ntBASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 AC092628.2-201ENST00000622492 339 ntBASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 AC073476.4-201ENST00000628409 72 ntBASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 XIAPP3-201ENST00000312918 795 ntBASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 RNU1-87P-201ENST00000363727 170 ntBASIC2.85□□□□□ -1.95
KIAA1549Q9HCM3 U3.11-201ENST00000364476 212 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms